RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 BCAP29Q9UHQ4 241 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 XPO7Q9UIA9 1087 aaKnown RBP6.71□□□□□ -1.34
SNHG1-225ENST00000545920 GRID1Q9ULK0 1009 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 ADAMTS5Q9UNA0 930 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 TRIM33Q9UPN9 1127 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 PLLPQ9Y342 182 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 NUB1Q9Y5A7 615 aa6.71□□□□□ -1.34
SNHG1-225ENST00000545920 ADAMTSL1Q8N6G6 1762 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 A0A1W2PPM1 405 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 TCRBV9S1A1TA0A576 114 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 CAPN14A8MX76 684 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 KBTBD13C9JR72 458 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 F8VP50 259 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 FCHO1O14526 889 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 CAPN9O14815 690 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 SLC22A2O15244 555 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 PEX1O43933 1283 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 FAM189A1O60320 539 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 ATP9AO75110 1047 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 SMIM24O75264 130 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 SNNO75324 88 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 H2AFYO75367 372 aaKnown RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 LRCH4O75427 683 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 SNUPNO95149 360 aaKnown RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 TRUB2O95900 331 aaKnown RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 RBP3P10745 1247 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 KRT10P13645 584 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 TAL1P17542 331 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 SP100P23497 879 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 GRK2P25098 689 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 RPS12P25398 132 aaKnown RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 CRABP2P29373 138 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 NR2C2P49116 596 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 IDH3AP50213 366 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 SLC26A2P50443 739 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 ST13P50502 369 aaKnown RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 ARSDP51689 593 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 CCNHP51946 323 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 ZNF143P52747 638 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 RPL7AP62424 266 aaKnown RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 TNFAIP2Q03169 654 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 FRG1Q14331 258 aaKnown RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 FASTKD3Q14CZ7 662 aaKnown RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 TARBP2Q15633 366 aaKnown RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 BBS9Q3SYG4 887 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 KAZNQ674X7 775 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 CWF19L1Q69YN2 538 aaKnown RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 SWSAP1Q6NVH7 229 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 TMEM154Q6P9G4 183 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 MTHFD1LQ6UB35 978 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 SLC30A10Q6XR72 485 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 MYLK4Q86YV6 388 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 ZDHHC17Q8IUH5 632 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 CDKL3Q8IVW4 592 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 WDR75Q8IWA0 830 aaKnown RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 SCUBE1Q8IWY4 988 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 KCTD6Q8NC69 237 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 CHST13Q8NET6 341 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 GATA6Q92908 595 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 ATP2A3Q93084 1043 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 E2F7Q96AV8 911 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 NLRP4Q96MN2 994 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 BTBD9Q96Q07 612 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 SRPK1Q96SB4 655 aaKnown RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 MPHOSPH6Q99547 160 aaKnown RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 MIPEPQ99797 713 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 FERMT1Q9BQL6 677 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 CENPKQ9BS16 269 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 KIFC3Q9BVG8 833 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 BCO2Q9BYV7 579 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 SUDS3Q9H7L9 328 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 ACAD9Q9H845 621 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 KCNK13Q9HB14 408 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 RAVER2Q9HCJ3 691 aaKnown RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 SRA1Q9HD15 236 aaKnown RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 C11orf16Q9NQ32 467 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 ZNF302Q9NR11 478 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 ARL8BQ9NVJ2 186 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 THAP1Q9NVV9 213 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 TAS2R1Q9NYW7 299 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 KANSL3Q9P2N6 904 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 FBXO40Q9UH90 709 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 MID2Q9UJV3 735 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 ITGA11Q9UKX5 1188 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 APOBEC2Q9Y235 224 aaKnown RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 FNDC3AQ9Y2H6 1198 aaKnown RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 PCDHAC2Q9Y5I4 1007 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 KCNMB2Q9Y691 235 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 PSME4Q14997 1843 aa6.7□□□□□ -1.34
SNHG1-225ENST00000545920 COL11A2P13942 1736 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-225ENST00000545920 A0A0G2JND7 137 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 SMIM31A0A1B0GVY4 71 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 DPPA5A6NC42 116 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 KLHL33A6NCF5 533 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 LRRIQ4A6NIV6 560 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 YDJCA8MPS7 323 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 HACD1B0YJ81 288 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 PI4K2BG5E9Z4 385 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 MDM4O15151 490 aa6.69□□□□□ -1.34
SNHG1-225ENST00000545920 CCNT2O60583 730 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms