RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ADRB2P07550 413 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 ZSCAN5DPP0CG00 497 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 RAG1P15918 1043 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 YBX3P16989 372 aaKnown RBP eCLIP13.15□□□□□ -0.39e-7■□□□□ 10.6
CHD4-211ENST00000544484 GLRA2P23416 452 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 BTG3Q14201 252 aaPredicted RBP13.15□□□□□ -0.3
CHD4-211ENST00000544484 SRPK1Q96SB4 655 aaKnown RBP13.15□□□□□ -0.3
CHD4-211ENST00000544484 ADGRE3Q9BY15 652 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 OSGEPL1Q9H4B0 414 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 PIF1Q9H611 641 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 NOD2Q9HC29 1040 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 GIMAP4Q9NUV9 329 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 MRGBPQ9NV56 204 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 F8W810 466 aa13.15□□□□□ -0.31
CHD4-211ENST00000544484 GUCA1CO95843 209 aa13.15□□□□□ -0.31
CHD4-211ENST00000544484 SERPINF2P08697 491 aa13.15□□□□□ -0.31
CHD4-211ENST00000544484 IL17AQ16552 155 aa13.15□□□□□ -0.31
CHD4-211ENST00000544484 C15orf59Q2T9L4 293 aaPredicted RBP13.15□□□□□ -0.31
CHD4-211ENST00000544484 KCNT2Q6UVM3 1135 aa13.15□□□□□ -0.31
CHD4-211ENST00000544484 ATP13A1Q9HD20 1204 aa13.15□□□□□ -0.31
CHD4-211ENST00000544484 C6orf203Q9P0P8 240 aaPredicted RBP13.15□□□□□ -0.31
CHD4-211ENST00000544484 KANSL3Q9P2N6 904 aa13.15□□□□□ -0.31
CHD4-211ENST00000544484 SLC24A2Q9UI40 661 aa13.15□□□□□ -0.31
CHD4-211ENST00000544484 MROH7Q68CQ1 1323 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 C16orf96A6NNT2 1141 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 SLC6A3Q01959 620 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 CCDC15Q0P6D6 951 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 FKBP1CQ5VVH2 108 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 CACUL1Q86Y37 369 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 CCDC126Q96EE4 140 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 DNAJC18Q9H819 358 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 CAAP1Q9H8G2 361 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 DMAP1Q9NPF5 467 aaPredicted RBP13.14□□□□□ -0.31
CHD4-211ENST00000544484 GPRC5DQ9NZD1 345 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 SIK3Q9Y2K2 1263 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 NFASCO94856 1347 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 HMGCRP04035 888 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 ULBP1Q9BZM6 244 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 PCDHB12Q9Y5F1 795 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 RNF103O00237 685 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 NR5A2O00482 541 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 SCAMP3O14828 347 aaKnown RBP13.14□□□□□ -0.31
CHD4-211ENST00000544484 ELAVL2Q12926 359 aaKnown RBP13.14□□□□□ -0.31
CHD4-211ENST00000544484 ITGA9Q13797 1035 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 HERC6Q8IVU3 1022 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 DPF3Q92784 378 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 SEMA4DQ92854 862 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 CNBD2Q96M20 576 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 FBXO44Q9H4M3 255 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 EFCAB1Q9HAE3 211 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 PPLO60437 1756 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 EPHB6O15197 1021 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 ATP9AO75110 1047 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 H2AFYO75367 372 aaKnown RBP13.14□□□□□ -0.31
CHD4-211ENST00000544484 THRAP10827 490 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 BMP6P22004 513 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 RAB27AP51159 221 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 N4BP2L1Q5TBK1 243 aaPredicted RBP13.14□□□□□ -0.31
CHD4-211ENST00000544484 ZNF410Q86VK4 478 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 WDR48Q8TAF3 677 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 CAVIN3Q969G5 261 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 VCPIP1Q96JH7 1222 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 SENP8Q96LD8 212 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 ZNF229Q9UJW7 825 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 SHOC2Q9UQ13 582 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 RIC1Q4ADV7 1423 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 A8MX80 341 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 NCAM2O15394 837 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 VAPBO95292 243 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 YWHAQP27348 245 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 RBL1P28749 1068 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 MLH1P40692 756 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 SCNN1GP51170 649 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 FKBP1AP62942 108 aaKnown RBP13.14□□□□□ -0.31
CHD4-211ENST00000544484 IFI35P80217 286 aaPredicted RBP13.14□□□□□ -0.31
CHD4-211ENST00000544484 CAMK2GQ13555 558 aaPredicted RBP13.14□□□□□ -0.31
CHD4-211ENST00000544484 RASA2Q15283 850 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 PGS1Q32NB8 556 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 OOSP2Q86WS3 158 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 P3H2Q8IVL5 708 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 TEX9Q8N6V9 391 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 TDRD5Q8NAT2 981 aaKnown RBP13.14□□□□□ -0.31
CHD4-211ENST00000544484 EPS8L1Q8TE68 723 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 CD248Q9HCU0 757 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 NCKIPSDQ9NZQ3 722 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 PLA2G4CQ9UP65 541 aa13.14□□□□□ -0.31
CHD4-211ENST00000544484 CKBP12277 381 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 SHROOM1Q2M3G4 852 aaPredicted RBP13.13□□□□□ -0.31
CHD4-211ENST00000544484 CELF3Q5SZQ8 465 aaKnown RBP13.13□□□□□ -0.31
CHD4-211ENST00000544484 ERAP2Q6P179 960 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 ADCK1Q86TW2 530 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 USP6NLQ92738 828 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 TBCBQ99426 244 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 CCT7Q99832 543 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 TKTL2Q9H0I9 626 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 LZTS1Q9Y250 596 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 GJB1P08034 283 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 NFICP08651 508 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 PAEPP09466 180 aa13.13□□□□□ -0.31
CHD4-211ENST00000544484 HALP42357 657 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms