RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 SETDB1Q15047 1291 aa16.33■□□□□ 0.2
SNRNP70-203ENST00000544278 PPP1R2P3Q6NXS1 205 aa16.33■□□□□ 0.2
SNRNP70-203ENST00000544278 TLK2Q86UE8 772 aa16.33■□□□□ 0.2
SNRNP70-203ENST00000544278 ALYREFQ86V81 257 aaKnown RBP16.33■□□□□ 0.2
SNRNP70-203ENST00000544278 RELL1Q8IUW5 271 aa16.33■□□□□ 0.2
SNRNP70-203ENST00000544278 BANPQ8N9N5 519 aa16.33■□□□□ 0.2
SNRNP70-203ENST00000544278 TTC8Q8TAM2 541 aa16.33■□□□□ 0.2
SNRNP70-203ENST00000544278 IQCGQ9H095 443 aaKnown RBP16.33■□□□□ 0.2
SNRNP70-203ENST00000544278 MANSC1Q9H8J5 431 aa16.33■□□□□ 0.2
SNRNP70-203ENST00000544278 ZNF358Q9NW07 568 aa16.33■□□□□ 0.2
SNRNP70-203ENST00000544278 DTLQ9NZJ0 730 aa16.33■□□□□ 0.2
SNRNP70-203ENST00000544278 PSAT1Q9Y617 370 aa16.33■□□□□ 0.2
SNRNP70-203ENST00000544278 M0QYT0 321 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 NRP1O14786 923 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 MGRN1O60291 552 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 DIAPH2O60879 1101 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 PCK1P35558 622 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 MLH1P40692 756 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 SNX17Q15036 470 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 NBPF20Q3BBV1 942 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 LDLRAD1Q5T700 205 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 KIAA0319Q5VV43 1072 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 GPRIN1Q7Z2K8 1008 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 USP33Q8TEY7 942 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 NKX1-2Q9UD57 310 aaPredicted RBP16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 ZMYND8Q9ULU4 1186 aaPredicted RBP16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 ENTPD5O75356 428 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 T-ENOLP0DO92 83 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 TAZQ16635 292 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 PPM1JQ5JR12 505 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 NOTUMQ6P988 496 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 RFWD3Q6PCD5 774 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 PCGF5Q86SE9 256 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 C10orf82Q8WW14 230 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 SRPK1Q96SB4 655 aaKnown RBP16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 GAD1Q99259 594 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 POPDC2Q9HBU9 364 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 COPEO14579 308 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 LYPLA1O75608 230 aaPredicted RBP16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 PTPN7P35236 360 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 RCN2Q14257 317 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 FAM187BQ17R55 369 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 ADGRF2Q8IZF7 708 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 TSSK1BQ9BXA7 367 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 SLC4A5Q9BY07 1137 aa16.32■□□□□ 0.2
SNRNP70-203ENST00000544278 DARSP14868 501 aaKnown RBP16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 TPH1P17752 444 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 MGAT1P26572 445 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 KLHL38Q2WGJ6 581 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 PKDCCQ504Y2 493 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 HEATR6Q6AI08 1181 aaKnown RBP16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 NDUFAF2Q8N183 169 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 APPL2Q8NEU8 664 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 CELF6Q96J87 481 aaKnown RBP16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 C20orf27Q9GZN8 174 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 ARL8BQ9NVJ2 186 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 SLC24A2Q9UI40 661 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 ZFP69BQ9UJL9 534 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 SMG5Q9UPR3 1016 aaKnown RBP16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 SLC15A5A6NIM6 579 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 PRPF4O43172 522 aaKnown RBP eCLIP16.31■□□□□ 0.23e-15■■■□□ 17.7
SNRNP70-203ENST00000544278 PGK1P00558 417 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 ATP2A2P16615 1042 aaKnown RBP16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 PSMB4P28070 264 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 BOLA3Q53S33 107 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 PLEKHH3Q7Z736 793 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 LONP2Q86WA8 852 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 SLC7A14Q8TBB6 771 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 KCNN1Q92952 543 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 WNT8BQ93098 351 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 PPP1R36Q96LQ0 422 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 KLC2Q9H0B6 622 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 INPP5FQ9Y2H2 1132 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 IPPQ9Y573 584 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 SBF1O95248 1867 aa16.31■□□□□ 0.2
SNRNP70-203ENST00000544278 I6L893 689 aaPredicted RBP16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 C6orf222P0C671 652 aaPredicted RBP16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 USP17L7P0C7H9 530 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 IRX1P78414 480 aaPredicted RBP16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 MFSD10Q14728 455 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 ZNF534Q76KX8 674 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 TMEM110Q86TL2 294 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 ARID3BQ8IVW6 561 aaPredicted RBP16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 VPS52Q8N1B4 723 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 ZNF276Q8N554 614 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 FBXO27Q8NI29 283 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 SHKBP1Q8TBC3 707 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 ABHD16BQ9H3Z7 469 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 MYBPHLA2RUH7 354 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 ENDOD1O94919 500 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 ERVK-10P10266 1014 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 MYL2P10916 166 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 GM2AP17900 193 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 STIP1P31948 543 aaKnown RBP16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 TMPRSS15P98073 1019 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 FAM219BQ5XKK7 198 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 NCBP2-AS2Q69YL0 99 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 CXCL17Q6UXB2 119 aa16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 RIBC1Q8N443 379 aaPredicted RBP16.3■□□□□ 0.2
SNRNP70-203ENST00000544278 SLC44A1Q8WWI5 657 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms