RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 TLR6Q9Y2C9 796 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 EPN1Q9Y6I3 576 aaPredicted RBP14.19□□□□□ -0.14
SP140-213ENST00000543928 SCINQ9Y6U3 715 aa14.19□□□□□ -0.14
SP140-213ENST00000543928 EIF3CLB5ME19 914 aaKnown RBP14.18□□□□□ -0.14
SP140-213ENST00000543928 SLC9A3R1O14745 358 aaPredicted RBP14.18□□□□□ -0.14
SP140-213ENST00000543928 NDUFA10O95299 355 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 IGLV3-27P01718 113 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 KLKB1P03952 638 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 CYP1A2P05177 515 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 SRFP11831 508 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 CORO1AP31146 461 aaKnown RBP14.18□□□□□ -0.14
SP140-213ENST00000543928 PTPN9P43378 593 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 IFNAR2P48551 515 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 HARS2P49590 506 aaKnown RBP14.18□□□□□ -0.14
SP140-213ENST00000543928 ATP11AP98196 1134 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 RING1Q06587 406 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 EIF4EBP2Q13542 120 aaPredicted RBP14.18□□□□□ -0.14
SP140-213ENST00000543928 SPA17Q15506 151 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 C15orf59Q2T9L4 293 aaPredicted RBP14.18□□□□□ -0.14
SP140-213ENST00000543928 CCDC14Q49A88 953 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 C10orf76Q5T2E6 689 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 TRIM68Q6AZZ1 485 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 Q6ZNB5 142 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 DENND1CQ8IV53 801 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 CTNNBL1Q8WYA6 563 aaPredicted RBP14.18□□□□□ -0.14
SP140-213ENST00000543928 IRF7Q92985 503 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 SLC39A13Q96H72 371 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 EIF3CQ99613 913 aaKnown RBP14.18□□□□□ -0.14
SP140-213ENST00000543928 DCLK3Q9C098 648 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 LINC00597Q9H2U6 94 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 CALCOCO1Q9P1Z2 691 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 TBC1D14Q9P2M4 693 aa14.18□□□□□ -0.14
SP140-213ENST00000543928 KIF26AQ9ULI4 1882 aaPredicted RBP14.18□□□□□ -0.14
SP140-213ENST00000543928 A0A0C4DFX4 3053 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 TMEM191CA6NGB0 347 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 ARNTLO00327 626 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 TMEM253P0C7T8 217 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 ARSAP15289 507 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 MAGEA1P43355 309 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 ZNF143P52747 638 aaPredicted RBP14.17□□□□□ -0.14
SP140-213ENST00000543928 OGDHQ02218 1023 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 DEUP1Q05D60 604 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 TNK2Q07912 1038 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 PDGFRLQ15198 375 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 CDO1Q16878 200 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 EML3Q32P44 896 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 ZC3H12AQ5D1E8 599 aaKnown RBP14.17□□□□□ -0.14
SP140-213ENST00000543928 SH3PXD2AQ5TCZ1 1133 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 NUGGCQ68CJ6 796 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 UNC45BQ8IWX7 931 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 RNF34Q969K3 372 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 PGAP3Q96FM1 320 aaPredicted RBP14.17□□□□□ -0.14
SP140-213ENST00000543928 NUP85Q9BW27 656 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 TRIM7Q9C029 511 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 EBF3Q9H4W6 596 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 HPS4Q9NQG7 708 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 SLC2A4RGQ9NR83 387 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 PIGVQ9NUD9 493 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 AGO1Q9UL18 857 aaKnown RBP14.17□□□□□ -0.14
SP140-213ENST00000543928 ZNF510Q9Y2H8 683 aa14.17□□□□□ -0.14
SP140-213ENST00000543928 CCP110O43303 1012 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 IPO7O95373 1038 aaKnown RBP14.16□□□□□ -0.14
SP140-213ENST00000543928 MOCS2O96007 188 aaPredicted RBP14.16□□□□□ -0.14
SP140-213ENST00000543928 F9P00740 461 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 APOEP02649 317 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 PSMA2P25787 234 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 CCR1P32246 355 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 RDXP35241 583 aaKnown RBP14.16□□□□□ -0.14
SP140-213ENST00000543928 CXCR3P49682 368 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 ATXN1P54253 815 aaKnown RBP14.16□□□□□ -0.14
SP140-213ENST00000543928 PFKPQ01813 784 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 RAB6CQ53S08 254 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 SND1Q7KZF4 910 aaKnown RBP eCLIP14.16□□□□□ -0.14
SP140-213ENST00000543928 STRADAQ7RTN6 431 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 BNIPLQ7Z465 357 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 LRRC8AQ8IWT6 810 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 UBALD2Q8IYN6 164 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 CCDC112Q8NEF3 446 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 FAM172AQ8WUF8 416 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 DNASE1L2Q92874 299 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 ATP2A3Q93084 1043 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 OTUB2Q96DC9 234 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 PDLIM2Q96JY6 352 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 CNPY3Q9BT09 278 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 RAB6CQ9H0N0 254 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 LUC7LQ9NQ29 371 aaKnown RBP14.16□□□□□ -0.14
SP140-213ENST00000543928 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.16□□□□□ -0.14
SP140-213ENST00000543928 GTSE1Q9NYZ3 720 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 CTTNBP2NLQ9P2B4 639 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 INTUQ9ULD6 942 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 PCDHA13Q9Y5I0 950 aa14.16□□□□□ -0.14
SP140-213ENST00000543928 BDP1A6H8Y1 2624 aa14.15□□□□□ -0.14
SP140-213ENST00000543928 ENDOD1O94919 500 aa14.15□□□□□ -0.14
SP140-213ENST00000543928 NFATC1O95644 943 aa14.15□□□□□ -0.14
SP140-213ENST00000543928 LATS1O95835 1130 aa14.15□□□□□ -0.14
SP140-213ENST00000543928 SLC2A3P11169 496 aa14.15□□□□□ -0.14
SP140-213ENST00000543928 SLC11A2P49281 568 aa14.15□□□□□ -0.14
SP140-213ENST00000543928 ZNF252P-AS1Q0IIN9 211 aa14.15□□□□□ -0.14
SP140-213ENST00000543928 RUNX3Q13761 415 aa14.15□□□□□ -0.14
SP140-213ENST00000543928 PPP2R5DQ14738 602 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms