RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-221ENST00000543545 ATXN1P54253 815 aaKnown RBP10.56□□□□□ -0.72
CPSF7-221ENST00000543545 NNTQ13423 1086 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 GRM2Q14416 872 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 ARL13BQ3SXY8 428 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 NUGGCQ68CJ6 796 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 STRADAQ7RTN6 431 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 FAM131BQ86XD5 332 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 DENND1CQ8IV53 801 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 ADHFE1Q8IWW8 467 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 ZDHHC14Q8IZN3 488 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 ATP6V0D2Q8N8Y2 350 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 BPIFB1Q8TDL5 484 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 ATRIPQ8WXE1 791 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 RSAD2Q8WXG1 361 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 NT5C3BQ969T7 300 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 NCAPGQ9BPX3 1015 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 TKTL2Q9H0I9 626 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 TRPV4Q9HBA0 871 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 PIGVQ9NUD9 493 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 TMEM51Q9NW97 253 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 TRIM10Q9UDY6 481 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 PCSK1NQ9UHG2 260 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.56□□□□□ -0.72
CPSF7-221ENST00000543545 NUMBLQ9Y6R0 609 aa10.56□□□□□ -0.72
CPSF7-221ENST00000543545 E2F8A0AVK6 867 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 BTNL10A8MVZ5 291 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 SLC9A3R1O14745 358 aaPredicted RBP10.55□□□□□ -0.72
CPSF7-221ENST00000543545 SPOPO43791 374 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 PRPSAP2O60256 369 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 MTA2O94776 668 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 PROSCO94903 275 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 MOCS3O95396 460 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 IGLV3-25P01717 112 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 TNNT1P13805 278 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 GJC1P36383 396 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 IFNAR2P48551 515 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 CXCR3P49682 368 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 HDAC4P56524 1084 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 ZXDBP98169 803 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 RING1Q06587 406 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 ACAP1Q15027 740 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 TCEAL1Q15170 157 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 HADHQ16836 314 aaKnown RBP10.55□□□□□ -0.72
CPSF7-221ENST00000543545 RAB6CQ53S08 254 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 BRMS1LQ5PSV4 323 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 ZFYVE27Q5T4F4 411 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 OTUD1Q5VV17 481 aaPredicted RBP10.55□□□□□ -0.72
CPSF7-221ENST00000543545 DAAM2Q86T65 1068 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 MFSD6LQ8IWD5 586 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 TPCN2Q8NHX9 752 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 CENPIQ92674 756 aaPredicted RBP10.55□□□□□ -0.72
CPSF7-221ENST00000543545 FGF14Q92915 247 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 WBP2Q969T9 261 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 ELSPBP1Q96BH3 223 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 RSPRY1Q96DX4 576 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 PGAP3Q96FM1 320 aaPredicted RBP10.55□□□□□ -0.72
CPSF7-221ENST00000543545 SLC39A13Q96H72 371 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 ZFRQ96KR1 1074 aaKnown RBP10.55□□□□□ -0.72
CPSF7-221ENST00000543545 CALR3Q96L12 384 aaKnown RBP10.55□□□□□ -0.72
CPSF7-221ENST00000543545 FCRL2Q96LA5 508 aaPredicted RBP10.55□□□□□ -0.72
CPSF7-221ENST00000543545 DDX50Q9BQ39 737 aaKnown RBP10.55□□□□□ -0.72
CPSF7-221ENST00000543545 RPP25Q9BUL9 199 aaKnown RBP10.55□□□□□ -0.72
CPSF7-221ENST00000543545 TRMT61BQ9BVS5 477 aaKnown RBP10.55□□□□□ -0.72
CPSF7-221ENST00000543545 ADAM33Q9BZ11 813 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 PLA2G2FQ9BZM2 168 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 SIK2Q9H0K1 926 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 RAB6CQ9H0N0 254 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 DUS2Q9NX74 493 aaKnown RBP10.55□□□□□ -0.72
CPSF7-221ENST00000543545 OBP2AQ9NY56 170 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 CALCOCO1Q9P1Z2 691 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 TBC1D14Q9P2M4 693 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 PRKAG3Q9UGI9 489 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 PYCARDQ9ULZ3 195 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 ZNF510Q9Y2H8 683 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 WNT6Q9Y6F9 365 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 BRWD1Q9NSI6 2320 aa10.55□□□□□ -0.72
CPSF7-221ENST00000543545 LOC730098B7Z3J9 87 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 ANHXE9PGG2 379 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 ACSL4O60488 711 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 BUB1BO60566 1050 aaPredicted RBP10.54□□□□□ -0.72
CPSF7-221ENST00000543545 ENDOD1O94919 500 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 KLKB1P03952 638 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 ASGR2P07307 311 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 BMP1P13497 986 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 PSMC3P17980 439 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 FCARP24071 287 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 MIPP30301 263 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 GDI1P31150 447 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 ADRA1BP35368 520 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 PCK1P35558 622 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 SLC1A1P43005 524 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 ZP2Q05996 745 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 ZNF252P-AS1Q0IIN9 211 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 USP4Q13107 963 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 HTR4Q13639 388 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 PPP2R5DQ14738 602 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 ZNF77Q15935 545 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 DAB2IPQ5VWQ8 1189 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 VITQ6UXI7 678 aa10.54□□□□□ -0.72
CPSF7-221ENST00000543545 HTR3DQ70Z44 454 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms