RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 SOX10P56693 466 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 LAMC2Q13753 1193 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 NFYCQ13952 458 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 NEDD8Q15843 81 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 CYP2R1Q6VVX0 501 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 FAM210AQ96ND0 272 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 KCNMB3Q9NPA1 279 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 CD274Q9NZQ7 290 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 GAKO14976 1311 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 A0A1W2PPM1 405 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 MRPL28Q13084 256 aaKnown RBP19.88■□□□□ 0.77
SUDS3-204ENST00000543473 NRF1Q16656 503 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 TAF2Q6P1X5 1199 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 DHFR2Q86XF0 187 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 GTF3C2Q8WUA4 911 aaPredicted RBP19.88■□□□□ 0.77
SUDS3-204ENST00000543473 ARL8BQ9NVJ2 186 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 M0QYT0 321 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 DDX3YO15523 660 aaKnown RBP19.88■□□□□ 0.77
SUDS3-204ENST00000543473 PEX1O43933 1283 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 COPG2Q9UBF2 871 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 PRKAG2Q9UGJ0 569 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 CROTQ9UKG9 612 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 A0A096LPK6 155 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 PYGLP06737 847 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 FMO1Q01740 532 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 CACNB2Q08289 660 aaPredicted RBP19.88■□□□□ 0.77
SUDS3-204ENST00000543473 GTF2H3Q13889 308 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 NFIL3Q16649 462 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 ATP13A4Q4VNC1 1196 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 ALLCQ8N6M5 410 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 DLG3Q92796 817 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 SEMA6AQ9H2E6 1030 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 ACSS3Q9H6R3 686 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 WDR27A2RRH5 827 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 CYP2F1P24903 491 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 NR1H2P55055 460 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 PLIN5Q00G26 463 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 RBM44Q6ZP01 1051 aaKnown RBP19.87■□□□□ 0.77
SUDS3-204ENST00000543473 FAM131BQ86XD5 332 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 WDR49Q8IV35 697 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 LRRC57Q8N9N7 239 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 KPNA4O00629 521 aaPredicted RBP19.87■□□□□ 0.77
SUDS3-204ENST00000543473 KRT72Q14CN4 511 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 ZCCHC7Q8N3Z6 543 aaKnown RBP19.87■□□□□ 0.77
SUDS3-204ENST00000543473 AFG1LQ8WV93 481 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 SLITRK1Q96PX8 696 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 TMEM109Q9BVC6 243 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 UBE2OQ9C0C9 1292 aaKnown RBP19.87■□□□□ 0.77
SUDS3-204ENST00000543473 VTI1BQ9UEU0 232 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 RARBP10826 455 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 SP100P23497 879 aaPredicted RBP19.87■□□□□ 0.77
SUDS3-204ENST00000543473 RAP1GAPP47736 663 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 CDK7P50613 346 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 UBE3AQ05086 875 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 SLC5A9Q2M3M2 681 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 PIGWQ7Z7B1 504 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 HORMAD1Q86X24 394 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 SHC3Q92529 594 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 PHACTR1Q9C0D0 580 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 DENND2DQ9H6A0 471 aaPredicted RBP19.87■□□□□ 0.77
SUDS3-204ENST00000543473 RRN3Q9NYV6 651 aa19.87■□□□□ 0.77
SUDS3-204ENST00000543473 PIN4Q9Y237 131 aaKnown RBP19.87■□□□□ 0.77
SUDS3-204ENST00000543473 DDHD2O94830 711 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 CALCAP01258 141 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 GNL1P36915 607 aaPredicted RBP19.86■□□□□ 0.77
SUDS3-204ENST00000543473 MAMLD1Q13495 774 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 DEPDC1Q5TB30 811 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 ACOT1Q86TX2 421 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 LRRC39Q96DD0 335 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 ZNF333Q96JL9 665 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 BBS2Q9BXC9 721 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 ATXN10Q9UBB4 475 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 BANF1O75531 89 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 MPOP05164 745 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 NCAM1P13591 858 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 EFCAB12Q6NXP0 572 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.86■□□□□ 0.77
SUDS3-204ENST00000543473 BHLHE22Q8NFJ8 381 aaPredicted RBP19.86■□□□□ 0.77
SUDS3-204ENST00000543473 PIH1D1Q9NWS0 290 aaKnown RBP19.86■□□□□ 0.77
SUDS3-204ENST00000543473 CLASP2O75122 1294 aaKnown RBP19.86■□□□□ 0.77
SUDS3-204ENST00000543473 GLRA2P23416 452 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 ALYREFQ86V81 257 aaKnown RBP19.86■□□□□ 0.77
SUDS3-204ENST00000543473 TSPAN14Q8NG11 270 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 FHDC1Q9C0D6 1143 aaPredicted RBP19.86■□□□□ 0.77
SUDS3-204ENST00000543473 A0A0B4J269 797 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 C5orf60A6NFR6 353 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 ALOX15BO15296 676 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 RPL22P35268 128 aaKnown RBP19.86■□□□□ 0.77
SUDS3-204ENST00000543473 FKBP1AP62942 108 aaKnown RBP19.86■□□□□ 0.77
SUDS3-204ENST00000543473 OTUD3Q5T2D3 398 aaPredicted RBP19.86■□□□□ 0.77
SUDS3-204ENST00000543473 ZNF572Q7Z3I7 529 aaPredicted RBP19.86■□□□□ 0.77
SUDS3-204ENST00000543473 TMEM176AQ96HP8 235 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 TEX12Q9BXU0 123 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 ZNF556Q9HAH1 456 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 FAM198AQ9UFP1 575 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 PACSIN3Q9UKS6 424 aa19.86■□□□□ 0.77
SUDS3-204ENST00000543473 FAM32AQ9Y421 112 aaKnown RBP19.86■□□□□ 0.77
SUDS3-204ENST00000543473 MYL4P12829 197 aa19.85■□□□□ 0.77
SUDS3-204ENST00000543473 MIPP30301 263 aa19.85■□□□□ 0.77
SUDS3-204ENST00000543473 ATP6V1E1P36543 226 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms