RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 GAREM2Q75VX8 874 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 PDZD4Q76G19 769 aaPredicted RBP11.09□□□□□ -0.63
DDB1-221ENST00000543162 PSTKQ8IV42 348 aaKnown RBP11.09□□□□□ -0.63
DDB1-221ENST00000543162 EFHBQ8N7U6 833 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 C12orf76Q8N812 135 aaPredicted RBP11.09□□□□□ -0.63
DDB1-221ENST00000543162 CMASQ8NFW8 434 aaPredicted RBP11.09□□□□□ -0.63
DDB1-221ENST00000543162 SMG7Q92540 1137 aaKnown RBP11.09□□□□□ -0.63
DDB1-221ENST00000543162 RAPGEF5Q92565 580 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 NTAN1Q96AB6 310 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 RNF25Q96BH1 459 aaPredicted RBP11.09□□□□□ -0.63
DDB1-221ENST00000543162 ZNF707Q96C28 371 aaPredicted RBP11.09□□□□□ -0.63
DDB1-221ENST00000543162 MS4A14Q96JA4 679 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 TTYH1Q9H313 450 aaPredicted RBP11.09□□□□□ -0.63
DDB1-221ENST00000543162 ATXN3LQ9H3M9 355 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 DHX35Q9H5Z1 703 aaKnown RBP11.09□□□□□ -0.63
DDB1-221ENST00000543162 TRPC7Q9HCX4 862 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.09□□□□□ -0.63
DDB1-221ENST00000543162 GPATCH2LQ9NWQ4 482 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 DNMT3BQ9UBC3 853 aaKnown RBP11.09□□□□□ -0.63
DDB1-221ENST00000543162 RNF14Q9UBS8 474 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 FZD10Q9ULW2 581 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 AP4E1Q9UPM8 1137 aa11.09□□□□□ -0.63
DDB1-221ENST00000543162 HBS1LQ9Y450 684 aaKnown RBP11.09□□□□□ -0.63
DDB1-221ENST00000543162 ANAPC1Q9H1A4 1944 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 A0A1W2PRU2 124 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 PGRMC1O00264 195 aaKnown RBP11.08□□□□□ -0.64
DDB1-221ENST00000543162 APOEP02649 317 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 HMBSP08397 361 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 KDELR1P24390 212 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 CDH6P55285 790 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 COPS2P61201 443 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 CYP4F8P98187 520 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 RING1Q06587 406 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 CKAP4Q07065 602 aaKnown RBP11.08□□□□□ -0.64
DDB1-221ENST00000543162 SCAPQ12770 1279 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 GRIN2CQ14957 1233 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 PDK2Q15119 407 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 CLUL1Q15846 466 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 ARHGAP15Q53QZ3 475 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 TXNDC8Q6A555 127 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 AADACL2Q6P093 401 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 TMC5Q6UXY8 1006 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 SPOCD1Q6ZMY3 1216 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 GRASPQ7Z6J2 395 aaPredicted RBP11.08□□□□□ -0.64
DDB1-221ENST00000543162 CREG2Q8IUH2 290 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 MAP7D3Q8IWC1 876 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 RASGEF1CQ8N431 466 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 ACTRT1Q8TDG2 376 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 FCRL2Q96LA5 508 aaPredicted RBP11.08□□□□□ -0.64
DDB1-221ENST00000543162 NAP1L3Q99457 506 aaPredicted RBP11.08□□□□□ -0.64
DDB1-221ENST00000543162 CALN1Q9BXU9 219 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 TKTL2Q9H0I9 626 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 L2HGDHQ9H9P8 463 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 ARHGEF38Q9NXL2 777 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 SLC12A6Q9UHW9 1150 aa11.08□□□□□ -0.64
DDB1-221ENST00000543162 OBSL1O75147 1896 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 TRAV19A0A0A6YYK7 116 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 C3orf70A6NLC5 250 aaPredicted RBP11.07□□□□□ -0.64
DDB1-221ENST00000543162 ZNF197O14709 1029 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 LINC01565O15544 149 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 GLP2RO95838 553 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 MOCS2O96007 188 aaPredicted RBP11.07□□□□□ -0.64
DDB1-221ENST00000543162 FGGP02679 453 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 MBL2P11226 248 aaPredicted RBP11.07□□□□□ -0.64
DDB1-221ENST00000543162 GJA1P17302 382 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 PFKLP17858 780 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 HDCP19113 662 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 DDX6P26196 483 aaKnown RBP eCLIP11.07□□□□□ -0.64
DDB1-221ENST00000543162 L1CAMP32004 1257 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 CCR2P41597 374 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 CDKN2BP42772 138 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 ARSEP51690 589 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 NTHL1P78549 312 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 COG7P83436 770 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 LLGL1Q15334 1064 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 DPYSL2Q16555 572 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 CA9Q16790 459 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 LONRF2Q1L5Z9 754 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 TFDP3Q5H9I0 405 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 PPP6R3Q5H9R7 873 aaPredicted RBP11.07□□□□□ -0.64
DDB1-221ENST00000543162 RARS2Q5T160 578 aaKnown RBP11.07□□□□□ -0.64
DDB1-221ENST00000543162 NUGGCQ68CJ6 796 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 MFSD7Q6UXD7 560 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 TMEM184AQ6ZMB5 413 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 ARL14EPQ8N8R7 260 aaPredicted RBP11.07□□□□□ -0.64
DDB1-221ENST00000543162 MAB21L3Q8N8X9 362 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 ATP6V0D2Q8N8Y2 350 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 MNS1Q8NEH6 495 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 SHKBP1Q8TBC3 707 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 SLC39A13Q96H72 371 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 HAPLN3Q96S86 360 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 OSBPL8Q9BZF1 889 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 RNF38Q9H0F5 515 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 PCDH18Q9HCL0 1135 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 ANLNQ9NQW6 1124 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 TMPRSS4Q9NRS4 437 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 SMARCAL1Q9NZC9 954 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 TTC7AQ9ULT0 858 aaPredicted RBP11.07□□□□□ -0.64
DDB1-221ENST00000543162 MTCH2Q9Y6C9 303 aa11.07□□□□□ -0.64
DDB1-221ENST00000543162 TRANK1O15050 2925 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms