RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 TNS4Q8IZW8 715 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 PCDH19Q8TAB3 1148 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 RNF139Q8WU17 664 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 OVCA2Q8WZ82 227 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 ANKRD7Q92527 254 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 PSMG2Q969U7 264 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 SLC39A13Q96H72 371 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 EMILIN2Q9BXX0 1053 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 PBX4Q9BYU1 374 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 NKX2-4Q9H2Z4 354 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 CCSER2Q9H7U1 834 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 ARHGEF38Q9NXL2 777 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 CWC15Q9P013 229 aaKnown RBP13.77□□□□□ -0.21
CHFR-221ENST00000542714 PCYOX1Q9UHG3 505 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 AMACRQ9UHK6 382 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 SNX10Q9Y5X0 201 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 DOCK6Q96HP0 2047 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 ZSCAN5CA6NGD5 496 aaPredicted RBP13.76□□□□□ -0.21
CHFR-221ENST00000542714 H0YGN5 161 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 TTI1O43156 1089 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 TBX18O95935 607 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 PECAM1P16284 738 aaPredicted RBP13.76□□□□□ -0.21
CHFR-221ENST00000542714 GOT1P17174 413 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 KLRC2P26717 231 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 KCNJ1P48048 391 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 FNTAP49354 379 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 CLCN4P51793 760 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 EPHB3P54753 998 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 AIF1P55008 147 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 EFEMP1Q12805 493 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 GPM6BQ13491 265 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 SNX1Q13596 522 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 PPP2R5DQ14738 602 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 VEPH1Q14D04 833 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 EFHC2Q5JST6 749 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 SLC9A4Q6AI14 798 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 CCDC137Q6PK04 289 aaKnown RBP13.76□□□□□ -0.21
CHFR-221ENST00000542714 SND1Q7KZF4 910 aaKnown RBP eCLIP13.76□□□□□ -0.21
CHFR-221ENST00000542714 DNAJB7Q7Z6W7 309 aaPredicted RBP13.76□□□□□ -0.21
CHFR-221ENST00000542714 MAP7D3Q8IWC1 876 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 ZNF276Q8N554 614 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 PLD5Q8N7P1 536 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 KREMEN2Q8NCW0 462 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 PDZD8Q8NEN9 1154 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 HAUS1Q96CS2 278 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 FCRL2Q96LA5 508 aaPredicted RBP13.76□□□□□ -0.21
CHFR-221ENST00000542714 SERPINB11Q96P15 392 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 CSPG4P5Q96PW8 444 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 HINFPQ9BQA5 517 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 TRIM51Q9BSJ1 452 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 TKTL2Q9H0I9 626 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 WDCPQ9H6R7 721 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 IL21Q9HBE4 155 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 OLA1Q9NTK5 396 aaKnown RBP13.76□□□□□ -0.21
CHFR-221ENST00000542714 RCOR3Q9P2K3 495 aaPredicted RBP13.76□□□□□ -0.21
CHFR-221ENST00000542714 RAB21Q9UL25 225 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 DOCK4Q8N1I0 1966 aa13.76□□□□□ -0.21
CHFR-221ENST00000542714 HELZP42694 1942 aaKnown RBP13.76□□□□□ -0.21
CHFR-221ENST00000542714 NOTCH4Q99466 2003 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 ZNF840PA6NDX5 716 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 KCNU1A8MYU2 1149 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 H3BNC9 293 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 LIASO43766 372 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 CLASP2O75122 1294 aaKnown RBP13.75□□□□□ -0.21
CHFR-221ENST00000542714 ZMYND10O75800 440 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 HEXIM1O94992 359 aaKnown RBP13.75□□□□□ -0.21
CHFR-221ENST00000542714 GLUD1P00367 558 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 IGLV3-27P01718 113 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 C8AP07357 584 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 VSNL1P62760 191 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 DR1Q01658 176 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 OTUD4Q01804 1114 aaKnown RBP13.75□□□□□ -0.21
CHFR-221ENST00000542714 NNTQ13423 1086 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 DHX34Q14147 1143 aaKnown RBP13.75□□□□□ -0.21
CHFR-221ENST00000542714 TFDP2Q14188 446 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 TRIP4Q15650 581 aaPredicted RBP13.75□□□□□ -0.21
CHFR-221ENST00000542714 BRMS1LQ5PSV4 323 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 C10orf120Q5SQS8 335 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 NPNTQ6UXI9 565 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 TMEM150AQ86TG1 271 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 JAMLQ86YT9 394 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 TMC8Q8IU68 726 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 SLC35B2Q8TB61 432 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 ACTL9Q8TC94 416 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 SLC22A17Q8WUG5 538 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 SLCO2A1Q92959 643 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 NKD2Q969F2 451 aaPredicted RBP13.75□□□□□ -0.21
CHFR-221ENST00000542714 LRRC3Q9BY71 257 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 GDF3Q9NR23 364 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 MARCH2Q9P0N8 246 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 STIM2Q9P246 746 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 SAE1Q9UBE0 346 aaPredicted RBP13.75□□□□□ -0.21
CHFR-221ENST00000542714 RASAL2Q9UJF2 1139 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 DNPEPQ9ULA0 475 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 NEU3Q9UQ49 428 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 TLR6Q9Y2C9 796 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 MFHAS1Q9Y4C4 1052 aa13.75□□□□□ -0.21
CHFR-221ENST00000542714 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.74□□□□□ -0.21
CHFR-221ENST00000542714 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.74□□□□□ -0.21
CHFR-221ENST00000542714 H3BRJ5 948 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms