RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 KLHDC4Q8TBB5 520 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 ZNF653Q96CK0 615 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 DHTKD1Q96HY7 919 aaPredicted RBP6.28□□□□□ -1.4
XRCC4-206ENST00000542685 TCHPQ9BT92 498 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 FAM192AQ9GZU8 254 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 ANKZF1Q9H8Y5 726 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 SPC25Q9HBM1 224 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 ADARB2Q9NS39 739 aaKnown RBP6.28□□□□□ -1.4
XRCC4-206ENST00000542685 WDR35Q9P2L0 1181 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 DMTF1Q9Y222 760 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 TRGV11A0A075B6L2 103 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 PRPF3O43395 683 aaKnown RBP6.27□□□□□ -1.41
XRCC4-206ENST00000542685 FIBPO43427 364 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 TIMM44O43615 452 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 ZBED4O75132 1171 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 SMIM24O75264 130 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 WDHD1O75717 1129 aaPredicted RBP6.27□□□□□ -1.41
XRCC4-206ENST00000542685 FLOT1O75955 427 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 GNAI2P04899 355 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 SBK3P0C264 359 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 CCDC159P0C7I6 412 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 TOP1P11387 765 aaKnown RBP6.27□□□□□ -1.41
XRCC4-206ENST00000542685 TRIM21P19474 475 aaKnown RBP6.27□□□□□ -1.41
XRCC4-206ENST00000542685 C5AR1P21730 350 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 SMARCA1P28370 1054 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 SLC6A4P31645 630 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 IL12RB1P42701 662 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 WASP42768 502 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 SULT2A1Q06520 285 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 KIF5AQ12840 1032 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 STIM1Q13586 685 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 INAVAQ3KP66 663 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 ATL3Q6DD88 541 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 C6orf89Q6UWU4 347 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 MAATS1Q7Z4T9 603 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 NECAB2Q7Z6G3 386 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 CCAR1Q8IX12 1150 aaKnown RBP6.27□□□□□ -1.41
XRCC4-206ENST00000542685 ZBTB8BQ8NAP8 495 aaPredicted RBP6.27□□□□□ -1.41
XRCC4-206ENST00000542685 ACTRT2Q8TDY3 377 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 NSMCE1Q8WV22 266 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 MAIP1Q8WWC4 291 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 IRGQQ8WZA9 623 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 SLC35B4Q969S0 331 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 HDAC10Q969S8 669 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 MED15Q96RN5 788 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 MEIS3Q99687 375 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 NACA2Q9H009 215 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 VCXQ9H320 206 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 KAT14Q9H8E8 782 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 ALG13Q9NP73 1137 aaKnown RBP6.27□□□□□ -1.41
XRCC4-206ENST00000542685 EXOC1Q9NV70 894 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 KCTD5Q9NXV2 234 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 DKK3Q9UBP4 350 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 TPCN1Q9ULQ1 816 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 HPCAL4Q9UM19 191 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 LIMCH1Q9UPQ0 1083 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 SBNO1A3KN83 1393 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 RFX7Q2KHR2 1363 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 MARF1Q9Y4F3 1742 aaKnown RBP6.27□□□□□ -1.41
XRCC4-206ENST00000542685 KAT6BQ8WYB5 2073 aa6.27□□□□□ -1.41
XRCC4-206ENST00000542685 LMO7Q8WWI1 1683 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 DDX60Q8IY21 1712 aaKnown RBP6.26□□□□□ -1.41
XRCC4-206ENST00000542685 CTAGE15A4D2H0 777 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 VWA3AA6NCI4 1184 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 ANKRD65E5RJM6 399 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 MGST3O14880 152 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 GRM6O15303 877 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 XPOTO43592 962 aaKnown RBP6.26□□□□□ -1.41
XRCC4-206ENST00000542685 STX10O60499 249 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 AGFG2O95081 481 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 ATP6V1G2O95670 118 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 BAG3O95817 575 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 FAM107AO95990 144 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 LINGO3P0C6S8 592 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 CTAGE8P0CG41 777 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 ALADP13716 330 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 ZNF37AP17032 561 aaPredicted RBP6.26□□□□□ -1.41
XRCC4-206ENST00000542685 CCND1P24385 295 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 COPB2P35606 906 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 ACADVLP49748 655 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 GNAQP50148 359 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 SLC16A1P53985 500 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 ELLP55199 621 aaPredicted RBP6.26□□□□□ -1.41
XRCC4-206ENST00000542685 GNGT1P63211 74 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 CDC42EP1Q00587 391 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 BYSLQ13895 437 aaKnown RBP6.26□□□□□ -1.41
XRCC4-206ENST00000542685 INAQ16352 499 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 ZNF362Q5T0B9 420 aaPredicted RBP6.26□□□□□ -1.41
XRCC4-206ENST00000542685 ALS2CLQ60I27 953 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 CACNA2D4Q7Z3S7 1137 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 CTAGE6Q86UF2 777 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 CTAGE4Q8IX94 777 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 C16orf71Q8IYS4 520 aaPredicted RBP6.26□□□□□ -1.41
XRCC4-206ENST00000542685 ARFGAP2Q8N6H7 521 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 FAM98AQ8NCA5 519 aaKnown RBP6.26□□□□□ -1.41
XRCC4-206ENST00000542685 CCDC148Q8NFR7 591 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 OTUD7AQ8TE49 926 aaPredicted RBP6.26□□□□□ -1.41
XRCC4-206ENST00000542685 SSH3Q8TE77 659 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 CDK19Q9BWU1 502 aa6.26□□□□□ -1.41
XRCC4-206ENST00000542685 NAA15Q9BXJ9 866 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms