RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 BEST1O76090 585 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 CD2BP2O95400 341 aaKnown RBP9.39□□□□□ -0.91
UBC-211ENST00000542416 C1SP09871 688 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 C7P10643 843 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 HNF1BP35680 557 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 PGFP49763 221 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 KIF11P52732 1056 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 CAMK2BQ13554 666 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 ZNF234Q14588 700 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 GEN1Q17RS7 908 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 KIF19Q2TAC6 998 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 C8orf34Q49A92 452 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 FYB2Q5VWT5 728 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 SCARA5Q6ZMJ2 495 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 LRRC69Q6ZNQ3 347 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 CLEC20AQ6ZU45 233 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 CCDC186Q7Z3E2 898 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 CPXM2Q8N436 756 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 TMEM174Q8WUU8 243 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 SNX19Q92543 992 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 GOLGA1Q92805 767 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 COL26A1Q96A83 441 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 CYFIP2Q96F07 1278 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 PIWIL1Q96J94 861 aaKnown RBP9.39□□□□□ -0.91
UBC-211ENST00000542416 NT5C1AQ9BXI3 368 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 CIPCQ9C0C6 399 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 BTBD1Q9H0C5 482 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 LHX5Q9H2C1 402 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 CYP3A43Q9HB55 503 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 FAM49BQ9NUQ9 324 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 OSER1Q9NX31 292 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.39□□□□□ -0.91
UBC-211ENST00000542416 ANKRD6Q9Y2G4 727 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.39□□□□□ -0.91
UBC-211ENST00000542416 PCDHGA1Q9Y5H4 931 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 MYO18AQ92614 2054 aaKnown RBP9.39□□□□□ -0.91
UBC-211ENST00000542416 PTPRDP23468 1912 aa9.39□□□□□ -0.91
UBC-211ENST00000542416 MYO16Q9Y6X6 1858 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 CAPN8A6NHC0 703 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 GOLGA8CPA6NN73 597 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 LRRIQ3A6PVS8 624 aaPredicted RBP9.38□□□□□ -0.91
UBC-211ENST00000542416 HHLA1C9JL84 531 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 RRP8O43159 456 aaKnown RBP9.38□□□□□ -0.91
UBC-211ENST00000542416 PAPSS1O43252 624 aaPredicted RBP9.38□□□□□ -0.91
UBC-211ENST00000542416 PPP6R2O75170 966 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 ASS1P00966 412 aaKnown RBP9.38□□□□□ -0.91
UBC-211ENST00000542416 CD27P26842 260 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 ADORA2BP29275 332 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 CORO1AP31146 461 aaKnown RBP9.38□□□□□ -0.91
UBC-211ENST00000542416 NASPP49321 788 aaPredicted RBP9.38□□□□□ -0.91
UBC-211ENST00000542416 COPAP53621 1224 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 BCAT1P54687 386 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 SLC8A3P57103 927 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 BNC1Q01954 994 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 EHHADHQ08426 723 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 CAMK2GQ13555 558 aaPredicted RBP9.38□□□□□ -0.91
UBC-211ENST00000542416 CUL4AQ13619 759 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 STK38Q15208 465 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 E2F4Q16254 413 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 PTPRNQ16849 979 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 ZACNQ401N2 412 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 TTC31Q49AM3 519 aaPredicted RBP9.38□□□□□ -0.91
UBC-211ENST00000542416 C6orf118Q5T5N4 469 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 ADAT2Q7Z6V5 191 aaKnown RBP9.38□□□□□ -0.91
UBC-211ENST00000542416 SLC9A9Q8IVB4 645 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 TTC39CQ8N584 583 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 C12orf29Q8N999 325 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 CCDC150Q8NCX0 1101 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 TMC2Q8TDI7 906 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 WFIKKN2Q8TEU8 576 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 DDI1Q8WTU0 396 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 DHX58Q96C10 678 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 NXPE2Q96DL1 559 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 BBC3Q96PG8 261 aaPredicted RBP9.38□□□□□ -0.91
UBC-211ENST00000542416 USP28Q96RU2 1077 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 GZF1Q9H116 711 aaPredicted RBP9.38□□□□□ -0.91
UBC-211ENST00000542416 NMUR1Q9HB89 426 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 SGK2Q9HBY8 427 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 FTSJ1Q9UET6 329 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 SCML1Q9UN30 329 aa9.38□□□□□ -0.91
UBC-211ENST00000542416 HELZ2Q9BYK8 2649 aaKnown RBP9.38□□□□□ -0.91
UBC-211ENST00000542416 LOC400499M0QZD8 3231 aa9.37□□□□□ -0.91
UBC-211ENST00000542416 HELZP42694 1942 aaKnown RBP9.37□□□□□ -0.91
UBC-211ENST00000542416 GCN1Q92616 2671 aaKnown RBP9.37□□□□□ -0.91
UBC-211ENST00000542416 MDM4O15151 490 aa9.37□□□□□ -0.91
UBC-211ENST00000542416 SPTLC2O15270 562 aa9.37□□□□□ -0.91
UBC-211ENST00000542416 YKT6O15498 198 aa9.37□□□□□ -0.91
UBC-211ENST00000542416 TSPAN3O60637 253 aa9.37□□□□□ -0.91
UBC-211ENST00000542416 VNN1O95497 513 aa9.37□□□□□ -0.91
UBC-211ENST00000542416 SEMA4FO95754 770 aa9.37□□□□□ -0.91
UBC-211ENST00000542416 KLKB1P03952 638 aa9.37□□□□□ -0.91
UBC-211ENST00000542416 DNTTP04053 509 aa9.37□□□□□ -0.91
UBC-211ENST00000542416 ATP5BP06576 529 aaKnown RBP9.37□□□□□ -0.91
UBC-211ENST00000542416 JUPP14923 745 aa9.37□□□□□ -0.91
UBC-211ENST00000542416 SYT1P21579 422 aa9.37□□□□□ -0.91
UBC-211ENST00000542416 HARS2P49590 506 aaKnown RBP9.37□□□□□ -0.91
UBC-211ENST00000542416 CASP4P49662 377 aa9.37□□□□□ -0.91
UBC-211ENST00000542416 C21orf59P57076 290 aa9.37□□□□□ -0.91
UBC-211ENST00000542416 RACK1P63244 317 aaKnown RBP9.37□□□□□ -0.91
UBC-211ENST00000542416 INCA1Q0VD86 236 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms