RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 USP29Q9HBJ7 922 aa4.2□□□□□ -1.74
LEMD3-204ENST00000542032 MLXIPLQ9NP71 852 aa4.2□□□□□ -1.74
LEMD3-204ENST00000542032 MYO1AQ9UBC5 1043 aa4.2□□□□□ -1.74
LEMD3-204ENST00000542032 SNX13Q9Y5W8 968 aa4.2□□□□□ -1.74
LEMD3-204ENST00000542032 ZMYM2Q9UBW7 1377 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 RRHO14718 337 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 PQBP1O60828 265 aaKnown RBP4.19□□□□□ -1.74
LEMD3-204ENST00000542032 TMIGD3P0DMS9 266 aaPredicted RBP4.19□□□□□ -1.74
LEMD3-204ENST00000542032 PRF1P14222 555 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 MST1P26927 711 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 SERPINB3P29508 390 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 GALNSP34059 522 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 PBX1P40424 430 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 DGKQP52824 942 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 HSF1Q00613 529 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 TRIM71Q2Q1W2 868 aaKnown RBP4.19□□□□□ -1.74
LEMD3-204ENST00000542032 KLHDC7AQ5VTJ3 777 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 RRAGBQ5VZM2 374 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 FAM90A2PQ658T7 463 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 USP17L6PQ6QN14 398 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 SHC4Q6S5L8 630 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 CRTC1Q6UUV9 634 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 CLEC4GQ6UXB4 293 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 TECPR1Q7Z6L1 1165 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 SPICE1Q8N0Z3 855 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 FSTL5Q8N475 847 aaPredicted RBP4.19□□□□□ -1.74
LEMD3-204ENST00000542032 NRACQ8N912 160 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 GPATCH11Q8N954 259 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 FAM71DQ8N9W8 422 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 CUL5Q93034 780 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 SARGQ9BW04 601 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 CINPQ9BW66 212 aaPredicted RBP4.19□□□□□ -1.74
LEMD3-204ENST00000542032 PPCSQ9HAB8 311 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 AGO4Q9HCK5 861 aaKnown RBP4.19□□□□□ -1.74
LEMD3-204ENST00000542032 DAAM1Q9Y4D1 1078 aa4.19□□□□□ -1.74
LEMD3-204ENST00000542032 APAF1O14727 1248 aa4.18□□□□□ -1.74
LEMD3-204ENST00000542032 NTN1O95631 604 aa4.18□□□□□ -1.74
LEMD3-204ENST00000542032 MYL4P12829 197 aa4.18□□□□□ -1.74
LEMD3-204ENST00000542032 TRIM27P14373 513 aa4.18□□□□□ -1.74
LEMD3-204ENST00000542032 GABRB3P28472 473 aa4.18□□□□□ -1.74
LEMD3-204ENST00000542032 TACR3P29371 465 aa4.18□□□□□ -1.74
LEMD3-204ENST00000542032 JAK3P52333 1124 aa4.18□□□□□ -1.74
LEMD3-204ENST00000542032 FOXG1P55316 489 aaPredicted RBP4.18□□□□□ -1.74
LEMD3-204ENST00000542032 RPS13P62277 151 aaKnown RBP4.18□□□□□ -1.74
LEMD3-204ENST00000542032 YPEL5P62699 121 aa4.18□□□□□ -1.74
LEMD3-204ENST00000542032 ID2Q02363 134 aa4.18□□□□□ -1.74
LEMD3-204ENST00000542032 MRNIPQ6NTE8 343 aa4.18□□□□□ -1.74
LEMD3-204ENST00000542032 IRF2BP2Q7Z5L9 587 aa4.18□□□□□ -1.74
LEMD3-204ENST00000542032 TFAP2DQ7Z6R9 452 aa4.18□□□□□ -1.74
LEMD3-204ENST00000542032 ABHD5Q8WTS1 349 aa4.18□□□□□ -1.74
LEMD3-204ENST00000542032 TM2D2Q9BX73 214 aa4.18□□□□□ -1.74
LEMD3-204ENST00000542032 RNF26Q9BY78 433 aaPredicted RBP4.18□□□□□ -1.74
LEMD3-204ENST00000542032 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.18□□□□□ -1.74
LEMD3-204ENST00000542032 NUAK2Q9H093 628 aa4.18□□□□□ -1.74
LEMD3-204ENST00000542032 TMEM184CQ9NVA4 438 aa4.18□□□□□ -1.74
LEMD3-204ENST00000542032 PI4KBQ9UBF8 816 aa4.18□□□□□ -1.74
LEMD3-204ENST00000542032 POM121BA6NF01 834 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 KPNA5O15131 536 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 DHHO43323 396 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 TMEM191BP0C7N4 346 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 PRIM2P49643 509 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 WDR5P61964 334 aaKnown RBP4.17□□□□□ -1.74
LEMD3-204ENST00000542032 RAE1P78406 368 aaKnown RBP4.17□□□□□ -1.74
LEMD3-204ENST00000542032 ZNF91Q05481 1191 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 MORC3Q14149 939 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 PFKFB3Q16875 520 aaPredicted RBP4.17□□□□□ -1.74
LEMD3-204ENST00000542032 FAM110CQ1W6H9 321 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 SLC5A9Q2M3M2 681 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 INO80DQ53TQ3 878 aaPredicted RBP4.17□□□□□ -1.74
LEMD3-204ENST00000542032 EARS2Q5JPH6 523 aaKnown RBP4.17□□□□□ -1.74
LEMD3-204ENST00000542032 CC2D1BQ5T0F9 858 aaKnown RBP4.17□□□□□ -1.74
LEMD3-204ENST00000542032 ERAP2Q6P179 960 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 TLDC1Q6P9B6 456 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 BEND5Q7L4P6 421 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 CCDC28AQ8IWP9 274 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 CLASRPQ8N2M8 674 aaKnown RBP4.17□□□□□ -1.74
LEMD3-204ENST00000542032 BCAS4Q8TDM0 211 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 ZFYVE19Q96K21 471 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 ADGRE3Q9BY15 652 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 PCGF6Q9BYE7 350 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 ABHD10Q9NUJ1 306 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 TMOD4Q9NZQ9 345 aa4.17□□□□□ -1.74
LEMD3-204ENST00000542032 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.16□□□□□ -1.74
LEMD3-204ENST00000542032 COQ9O75208 318 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 PLAUP00749 431 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 EGR1P18146 543 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 DUSP1P28562 367 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 STT3AP46977 705 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 PLCD1P51178 756 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 GPS1Q13098 491 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 GAB1Q13480 694 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 ATP1A4Q13733 1029 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 KPNB1Q14974 876 aaKnown RBP4.16□□□□□ -1.74
LEMD3-204ENST00000542032 SAFBQ15424 915 aaKnown RBP eCLIP4.16□□□□□ -1.74
LEMD3-204ENST00000542032 ZRSR2Q15696 482 aaKnown RBP4.16□□□□□ -1.74
LEMD3-204ENST00000542032 LEXMQ3ZCV2 418 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 FAM83BQ5T0W9 1011 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 FAXCQ5TGI0 409 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 RAP1GAP2Q684P5 730 aa4.16□□□□□ -1.74
LEMD3-204ENST00000542032 SKAP1Q86WV1 359 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms