RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 DPY19L2P1Q6NXN4 242 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 SLC36A4Q6YBV0 504 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 DENND5BQ6ZUT9 1274 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 ADGRG2Q8IZP9 1017 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 PCED1BQ96HM7 432 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 TMEM176AQ96HP8 235 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 LRIG1Q96JA1 1093 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 KREMEN1Q96MU8 473 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 DPEP3Q9H4B8 488 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 SIX2Q9NPC8 291 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 UBE2TQ9NPD8 197 aaPredicted RBP9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 RTN4Q9NQC3 1192 aaKnown RBP9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 CFAP97Q9P2B7 532 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 HMGXB4Q9UGU5 601 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 CNTN6Q9UQ52 1028 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 SIK3Q9Y2K2 1263 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 AKAP13Q12802 2813 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 FAM221BA6H8Z2 402 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 UPK3BL1B0FP48 263 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 UPK3BL2E5RIL1 263 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 ADAM23O75077 832 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 NDUFS2O75306 463 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 ADH1CP00326 375 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 SERPINC1P01008 464 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 PAEPP09466 180 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 MBL2P11226 248 aaPredicted RBP9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 CD59P13987 128 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 HOXB2P14652 356 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 GABRG2P18507 467 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 ACO1P21399 889 aaKnown RBP9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 HOXD12P35452 270 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 GRIA2P42262 883 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 KIR2DL1P43626 348 aaPredicted RBP9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 RAD23BP54727 409 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 USP46P62068 366 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 FANCCQ00597 558 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 UBXN1Q04323 297 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 NR1I3Q14994 352 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 HSF5Q4G112 596 aaPredicted RBP9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 MDH1BQ5I0G3 518 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 SPDYCQ5MJ68 293 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 KLHDC7AQ5VTJ3 777 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 BTBD8Q5XKL5 378 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 VSTM1Q6UX27 236 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 RRAGAQ7L523 313 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 RABEPKQ7Z6M1 372 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 ACOT1Q86TX2 421 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 ZNF513Q8N8E2 541 aaPredicted RBP9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 SLC4A11Q8NBS3 891 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 SHC3Q92529 594 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 KAT5Q92993 513 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 MYLPFQ96A32 169 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 CEP295NLQ96MC4 621 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 HSPA12BQ96MM6 686 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 TWNKQ96RR1 684 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 ELOVL4Q9GZR5 314 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 RNF38Q9H0F5 515 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 CAPN10Q9HC96 672 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 CALCOCO1Q9P1Z2 691 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 KIAA1257Q9ULG3 409 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 CYP8B1Q9UNU6 501 aa9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 MYO18AQ92614 2054 aaKnown RBP9.15□□□□□ -0.94
CLSTN3-212ENST00000541770 WDFY3Q8IZQ1 3526 aa9.15□□□□□ -0.95
CLSTN3-212ENST00000541770 IGF2RP11717 2491 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 ATP8B3O60423 1300 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 A0A1W2PQC6 194 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 GOLGA8CPA6NN73 597 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 TEX33O43247 280 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 UCHL3P15374 230 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 MAOBP27338 520 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 TNFRSF4P43489 277 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 ZNF132P52740 706 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 UBASH3AP57075 661 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 APBA1Q02410 837 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 GAD2Q05329 585 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 SYCP1Q15431 976 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 ANO4Q32M45 955 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 ZNF394Q53GI3 561 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 LY6G5CQ5SRR4 150 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 C10orf76Q5T2E6 689 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 PEAR1Q5VY43 1037 aaPredicted RBP9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 ARHGAP17Q68EM7 881 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 SDE2Q6IQ49 451 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 GJB7Q6PEY0 223 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 RHBDF2Q6PJF5 856 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 TMEM270Q6UE05 265 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 PAQR9Q6ZVX9 377 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 TRMT11Q7Z4G4 463 aaKnown RBP9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 SLC41A1Q8IVJ1 513 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 NAXDQ8IW45 347 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 FUKQ8N0W3 1084 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 SETD7Q8WTS6 366 aaKnown RBP9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 ADAMTS14Q8WXS8 1223 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 CYFIP2Q96F07 1278 aa9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 HEXIM2Q96MH2 286 aaKnown RBP9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 NAP1L5Q96NT1 182 aaPredicted RBP9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 HNRNPABQ99729 332 aaKnown RBP9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 NAA15Q9BXJ9 866 aaKnown RBP9.14□□□□□ -0.95
CLSTN3-212ENST00000541770 B3GNT5Q9BYG0 378 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms