RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ASNSD1Q9NWL6 643 aa17.61■□□□□ 0.41
CD9-209ENST00000540891 PLK2Q9NYY3 685 aa17.61■□□□□ 0.41
CD9-209ENST00000540891 WDR35Q9P2L0 1181 aa17.61■□□□□ 0.41
CD9-209ENST00000540891 CEP83Q9Y592 693 aa17.61■□□□□ 0.41
CD9-209ENST00000540891 APODP05090 189 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 GLI1P08151 1106 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 CISD3P0C7P0 127 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 GRIA2P42262 883 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 HARS2P49590 506 aaKnown RBP17.6■□□□□ 0.41
CD9-209ENST00000540891 SEC13P55735 322 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 TBX4P57082 545 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 NOMO3P69849 1222 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 FMO1Q01740 532 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 CDR2Q01850 454 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 RING1Q06587 406 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 DMWDQ09019 674 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 NNTQ13423 1086 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 OR6B2Q6IFH4 312 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 ZNF677Q86XU0 584 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 DEFB106AQ8N104 65 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 USP33Q8TEY7 942 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 BHMTQ93088 406 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 SERPINB11Q96P15 392 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 DNAJC17Q9NVM6 304 aaKnown RBP17.6■□□□□ 0.41
CD9-209ENST00000540891 DEC1Q9P2X7 70 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 FBXO10Q9UK96 956 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 HCN2Q9UL51 889 aa17.6■□□□□ 0.41
CD9-209ENST00000540891 FANCMQ8IYD8 2048 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 CAPN9O14815 690 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 ATG13O75143 517 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 GRAP2O75791 330 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 LSM8O95777 96 aaKnown RBP17.59■□□□□ 0.41
CD9-209ENST00000540891 LATS1O95835 1130 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 CYP1A1P04798 512 aaPredicted RBP17.59■□□□□ 0.41
CD9-209ENST00000540891 KIR2DL1P43626 348 aaPredicted RBP17.59■□□□□ 0.41
CD9-209ENST00000540891 GABRB2P47870 512 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 SLC6A3Q01959 620 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 NR1I3Q14994 352 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 EFHC1Q5JVL4 640 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 EMC10Q5UCC4 262 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 NAA35Q5VZE5 725 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 TOGARAM2Q6ZUX3 1019 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 SLC26A9Q7LBE3 791 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 TERB1Q8NA31 727 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 ZNF397Q8NF99 534 aaPredicted RBP17.59■□□□□ 0.41
CD9-209ENST00000540891 IPO4Q8TEX9 1081 aaKnown RBP17.59■□□□□ 0.41
CD9-209ENST00000540891 BAP1Q92560 729 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 XPO6Q96QU8 1125 aaKnown RBP17.59■□□□□ 0.41
CD9-209ENST00000540891 TRIM62Q9BVG3 475 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 ZSCAN32Q9NX65 697 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 CLEC4EQ9ULY5 219 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 TLR6Q9Y2C9 796 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 ATG2BQ96BY7 2078 aa17.59■□□□□ 0.41
CD9-209ENST00000540891 DMDP11532 3685 aa17.58■□□□□ 0.41
CD9-209ENST00000540891 A0A1W2PQC6 194 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 IRAK2O43187 625 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 LILRB5O75023 590 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 HSF2BPO75031 334 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 CAVIN2O95810 425 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 TRUB2O95900 331 aaKnown RBP17.58■□□□□ 0.4
CD9-209ENST00000540891 TNFRSF4P43489 277 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 NFKBIBQ15653 356 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 FILIP1LQ4L180 1135 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 C2CD6Q53TS8 623 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 C2orf27AQ580R0 203 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 DCAF6Q58WW2 860 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 FAM133BQ5BKY9 247 aaKnown RBP17.58■□□□□ 0.4
CD9-209ENST00000540891 ADGRF1Q5T601 910 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 NUGGCQ68CJ6 796 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 NADSYN1Q6IA69 706 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 GRAMD4Q6IC98 578 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 SYT13Q7L8C5 426 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 XYLT1Q86Y38 959 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 ZDHHC17Q8IUH5 632 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 CPA5Q8WXQ8 436 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 PCDHB18PQ96TA0 734 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 FAM126AQ9BYI3 521 aaPredicted RBP17.58■□□□□ 0.4
CD9-209ENST00000540891 PCDHGA2Q9Y5H1 932 aa17.58■□□□□ 0.4
CD9-209ENST00000540891 GOLGA6L7A0A1B0GV03 622 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 TBC1D3BA6NDS4 549 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 PRRT4C9JH25 899 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 DAB1O75553 588 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 SERPINC1P01008 464 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 HOXA6P31267 233 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 HOXD11P31277 338 aaPredicted RBP17.57■□□□□ 0.4
CD9-209ENST00000540891 SLC6A4P31645 630 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 DGKGP49619 791 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 SGSHP51688 502 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 SNX16P57768 344 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 MRPS21P82921 87 aaKnown RBP17.57■□□□□ 0.4
CD9-209ENST00000540891 FANCCQ00597 558 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 ARID5AQ03989 594 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 PPP2R5DQ14738 602 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 C10orf76Q5T2E6 689 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 OTUD1Q5VV17 481 aaPredicted RBP17.57■□□□□ 0.4
CD9-209ENST00000540891 CACNA2D4Q7Z3S7 1137 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 ALYREFQ86V81 257 aaKnown RBP17.57■□□□□ 0.4
CD9-209ENST00000540891 ERICH1Q86X53 443 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 UNC45BQ8IWX7 931 aa17.57■□□□□ 0.4
CD9-209ENST00000540891 IL17RCQ8NAC3 791 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms