RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ZNF670Q9BS34 389 aa12.71□□□□□ -0.38
NPC1-202ENST00000540608 GCOM2Q9BZD3 368 aaPredicted RBP12.71□□□□□ -0.38
NPC1-202ENST00000540608 PPP1R12CQ9BZL4 782 aa12.71□□□□□ -0.38
NPC1-202ENST00000540608 PIDD1Q9HB75 910 aa12.71□□□□□ -0.38
NPC1-202ENST00000540608 NDE1Q9NXR1 346 aa12.71□□□□□ -0.38
NPC1-202ENST00000540608 MOCS1Q9NZB8 636 aa12.71□□□□□ -0.38
NPC1-202ENST00000540608 PDP2Q9P2J9 529 aa12.71□□□□□ -0.38
NPC1-202ENST00000540608 KAT6AQ92794 2004 aa12.71□□□□□ -0.38
NPC1-202ENST00000540608 ZNF487B1APH4 448 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 FKBP6O75344 327 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 MAP3K6O95382 1288 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 GSRP00390 522 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 PFKMP08237 780 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 CRABP2P29373 138 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 CPOXP36551 454 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 NDST1P52848 882 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 INCA1Q0VD86 236 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 UBAP2LQ14157 1087 aaKnown RBP12.7□□□□□ -0.38
NPC1-202ENST00000540608 CA9Q16790 459 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 WDR75Q8IWA0 830 aaKnown RBP12.7□□□□□ -0.38
NPC1-202ENST00000540608 GALNT15Q8N3T1 639 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 FAM172AQ8WUF8 416 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 DEPDC1BQ8WUY9 529 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 TRIM56Q9BRZ2 755 aaKnown RBP12.7□□□□□ -0.38
NPC1-202ENST00000540608 MINDY3Q9H8M7 445 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 XAB2Q9HCS7 855 aaKnown RBP12.7□□□□□ -0.38
NPC1-202ENST00000540608 NGRNQ9NPE2 291 aaKnown RBP12.7□□□□□ -0.38
NPC1-202ENST00000540608 TSPAN16Q9UKR8 245 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 SOX13Q9UN79 622 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 A0A088AWK7 358 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 MDM4O15151 490 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 IQCF3P0C7M6 154 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 DSG1Q02413 1049 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 FASTKD1Q53R41 847 aaKnown RBP12.7□□□□□ -0.38
NPC1-202ENST00000540608 CWF19L1Q69YN2 538 aaKnown RBP12.7□□□□□ -0.38
NPC1-202ENST00000540608 AAGABQ6PD74 315 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 ZCCHC23Q6ZST2 131 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 MFN1Q8IWA4 741 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 LRRN4Q8WUT4 740 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 ZFAND2BQ8WV99 257 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 ECSITQ9BQ95 431 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 SNRNP25Q9BV90 132 aaKnown RBP12.7□□□□□ -0.38
NPC1-202ENST00000540608 SPATC1LQ9H0A9 340 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 STN1Q9H668 368 aaKnown RBP12.7□□□□□ -0.38
NPC1-202ENST00000540608 ASB7Q9H672 318 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 NRDE2Q9H7Z3 1164 aa12.7□□□□□ -0.38
NPC1-202ENST00000540608 TOMM70O94826 608 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 KLHL2O95198 593 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 SDC4P31431 198 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 ROR2Q01974 943 aaKnown RBP12.69□□□□□ -0.38
NPC1-202ENST00000540608 TUBB3Q13509 450 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 FOXB2Q5VYV0 432 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 MBLAC2Q68D91 279 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 OLFML1Q6UWY5 402 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 IZUMO2Q6UXV1 221 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 ADGRG6Q86SQ4 1221 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 PPP1R14CQ8TAE6 165 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 PIWIL2Q8TC59 973 aaKnown RBP12.69□□□□□ -0.38
NPC1-202ENST00000540608 ACMSDQ8TDX5 336 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 FAM192AQ9GZU8 254 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 FAM124BQ9H5Z6 455 aaPredicted RBP12.69□□□□□ -0.38
NPC1-202ENST00000540608 LTBP3Q9NS15 1303 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 ALDH1A2O94788 518 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 BAG2O95816 211 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 PGK2P07205 417 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 C6orf222P0C671 652 aaPredicted RBP12.69□□□□□ -0.38
NPC1-202ENST00000540608 TNFAIP2Q03169 654 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 EFCAB12Q6NXP0 572 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 TTC39CQ8N584 583 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 KHSRPQ92945 711 aaKnown RBP eCLIP12.69□□□□□ -0.38
NPC1-202ENST00000540608 TTC1Q99614 292 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 APOL6Q9BWW8 343 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 GPRC5DQ9NZD1 345 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 PTPRFP10586 1907 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 A0A0G2JMZ2 1700 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 LRRC37A2A6NM11 1700 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 TOP3BO95985 862 aaKnown RBP12.69□□□□□ -0.38
NPC1-202ENST00000540608 LYNP07948 512 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 MCF2P10911 925 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 CYP2F1P24903 491 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 NR2C2P49116 596 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 RGS7P49802 495 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 SLC6A3Q01959 620 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 HIC1Q14526 733 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 STILQ15468 1287 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 PPP6R3Q5H9R7 873 aaPredicted RBP12.69□□□□□ -0.38
NPC1-202ENST00000540608 TEDDM1Q5T9Z0 273 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 NT5C1AQ9BXI3 368 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 NFKBIZQ9BYH8 718 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 PRMT7Q9NVM4 692 aaPredicted RBP12.69□□□□□ -0.38
NPC1-202ENST00000540608 EMCNQ9ULC0 261 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 PPM1HQ9ULR3 514 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 DNAJC16Q9Y2G8 782 aa12.69□□□□□ -0.38
NPC1-202ENST00000540608 POLR2AP24928 1970 aaKnown RBP12.68□□□□□ -0.38
NPC1-202ENST00000540608 NOP56O00567 594 aaKnown RBP12.68□□□□□ -0.38
NPC1-202ENST00000540608 SOCS7O14512 581 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 ITM2AO43736 263 aa12.68□□□□□ -0.38
NPC1-202ENST00000540608 FGF3P11487 239 aaPredicted RBP12.68□□□□□ -0.38
NPC1-202ENST00000540608 ZFXP17010 805 aaPredicted RBP12.68□□□□□ -0.38
NPC1-202ENST00000540608 DESP17661 470 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms