RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 SCYL2Q6P3W7 929 aa19.69■□□□□ 0.74
TNFRSF1A-213ENST00000540022 TADA2BQ86TJ2 420 aa19.69■□□□□ 0.74
TNFRSF1A-213ENST00000540022 FAM131BQ86XD5 332 aa19.69■□□□□ 0.74
TNFRSF1A-213ENST00000540022 MAB21L3Q8N8X9 362 aa19.69■□□□□ 0.74
TNFRSF1A-213ENST00000540022 ITFG1Q8TB96 612 aa19.69■□□□□ 0.74
TNFRSF1A-213ENST00000540022 SERPINB11Q96P15 392 aa19.69■□□□□ 0.74
TNFRSF1A-213ENST00000540022 PEBP4Q96S96 227 aa19.69■□□□□ 0.74
TNFRSF1A-213ENST00000540022 SLC46A2Q9BY10 475 aa19.69■□□□□ 0.74
TNFRSF1A-213ENST00000540022 PCSK1NQ9UHG2 260 aa19.69■□□□□ 0.74
TNFRSF1A-213ENST00000540022 CD207Q9UJ71 328 aa19.69■□□□□ 0.74
TNFRSF1A-213ENST00000540022 MRPS23Q9Y3D9 190 aaKnown RBP19.69■□□□□ 0.74
TNFRSF1A-213ENST00000540022 F9P00740 461 aa19.68■□□□□ 0.74
TNFRSF1A-213ENST00000540022 TNNT1P13805 278 aa19.68■□□□□ 0.74
TNFRSF1A-213ENST00000540022 HDCP19113 662 aa19.68■□□□□ 0.74
TNFRSF1A-213ENST00000540022 GBP1P32455 592 aa19.68■□□□□ 0.74
TNFRSF1A-213ENST00000540022 ITIH3Q06033 890 aa19.68■□□□□ 0.74
TNFRSF1A-213ENST00000540022 SMAD4Q13485 552 aaKnown RBP19.68■□□□□ 0.74
TNFRSF1A-213ENST00000540022 SMAD2Q15796 467 aaKnown RBP19.68■□□□□ 0.74
TNFRSF1A-213ENST00000540022 GPR158Q5T848 1215 aa19.68■□□□□ 0.74
TNFRSF1A-213ENST00000540022 SYT10Q6XYQ8 523 aa19.68■□□□□ 0.74
TNFRSF1A-213ENST00000540022 CYP4V2Q6ZWL3 525 aaPredicted RBP19.68■□□□□ 0.74
TNFRSF1A-213ENST00000540022 NCAPGQ9BPX3 1015 aa19.68■□□□□ 0.74
TNFRSF1A-213ENST00000540022 NACA2Q9H009 215 aa19.68■□□□□ 0.74
TNFRSF1A-213ENST00000540022 USP18Q9UMW8 372 aa19.68■□□□□ 0.74
TNFRSF1A-213ENST00000540022 JRKLQ9Y4A0 524 aa19.68■□□□□ 0.74
TNFRSF1A-213ENST00000540022 SLC12A8A0AV02 714 aa19.67■□□□□ 0.74
TNFRSF1A-213ENST00000540022 ENC1O14682 589 aa19.67■□□□□ 0.74
TNFRSF1A-213ENST00000540022 CEBPBP17676 345 aa19.67■□□□□ 0.74
TNFRSF1A-213ENST00000540022 MARCKSL1P49006 195 aa19.67■□□□□ 0.74
TNFRSF1A-213ENST00000540022 CXCR3P49682 368 aa19.67■□□□□ 0.74
TNFRSF1A-213ENST00000540022 POTEHQ6S545 545 aa19.67■□□□□ 0.74
TNFRSF1A-213ENST00000540022 ING5Q8WYH8 240 aa19.67■□□□□ 0.74
TNFRSF1A-213ENST00000540022 KRT35Q92764 455 aa19.67■□□□□ 0.74
TNFRSF1A-213ENST00000540022 SLC39A13Q96H72 371 aa19.67■□□□□ 0.74
TNFRSF1A-213ENST00000540022 HES6Q96HZ4 224 aa19.67■□□□□ 0.74
TNFRSF1A-213ENST00000540022 TLR10Q9BXR5 811 aa19.67■□□□□ 0.74
TNFRSF1A-213ENST00000540022 TASP1Q9H6P5 420 aa19.67■□□□□ 0.74
TNFRSF1A-213ENST00000540022 DNAI1Q9UI46 699 aa19.67■□□□□ 0.74
TNFRSF1A-213ENST00000540022 FAM50BQ9Y247 325 aa19.67■□□□□ 0.74
TNFRSF1A-213ENST00000540022 USP15Q9Y4E8 981 aaPredicted RBP19.67■□□□□ 0.74
TNFRSF1A-213ENST00000540022 ZNF638Q14966 1978 aaKnown RBP19.67■□□□□ 0.74
TNFRSF1A-213ENST00000540022 MBL2P11226 248 aaPredicted RBP19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 GJC1P36383 396 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 TBX4P57082 545 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 NNTQ13423 1086 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 TRIP4Q15650 581 aaPredicted RBP19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 HADHQ16836 314 aaKnown RBP19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 ATP13A4Q4VNC1 1196 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 ARHGAP15Q53QZ3 475 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 ZC3H12AQ5D1E8 599 aaKnown RBP19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 CES5AQ6NT32 575 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 RHOT1Q8IXI2 618 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 CCDC185Q8N715 623 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 ZFRQ96KR1 1074 aaKnown RBP19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 KLF16Q9BXK1 252 aaPredicted RBP19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 ZWILCHQ9H900 591 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 ANLNQ9NQW6 1124 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 TMPRSS4Q9NRS4 437 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 GKN1Q9NS71 199 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 TLR6Q9Y2C9 796 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 TRAV19A0A0A6YYK7 116 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 I6L893 689 aaPredicted RBP19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 DDX3YO15523 660 aaKnown RBP19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 PRPSAP2O60256 369 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 ATP1A1P05023 1023 aaKnown RBP19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 HMBSP08397 361 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 PFKLP17858 780 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 FSHRP23945 695 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 DDX6P26196 483 aaKnown RBP eCLIP19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 CTNNA2P26232 953 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 CTNNA1P35221 906 aaKnown RBP19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 CBX2Q14781 532 aaPredicted RBP19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 ATAT1Q5SQI0 421 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 LRRC38Q5VT99 294 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 SND1Q7KZF4 910 aaKnown RBP eCLIP19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 SUSD6Q92537 303 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 RNF34Q969K3 372 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 FCRL2Q96LA5 508 aaPredicted RBP19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 WDCPQ9H6R7 721 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 SMPD4Q9NXE4 827 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 HBS1LQ9Y450 684 aaKnown RBP19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 PCDHA3Q9Y5H8 950 aa19.66■□□□□ 0.74
TNFRSF1A-213ENST00000540022 CLUHO75153 1309 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 SOBPA7XYQ1 873 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 MIF4GDA9UHW6 222 aaKnown RBP19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 IGLV3-27P01718 113 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 CKMP06732 381 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 RARAP10276 462 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 CCR1P32246 355 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 PEX5P50542 639 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 DNA2P51530 1060 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 SLC7A9P82251 487 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 ZXDBP98169 803 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 ZP2Q05996 745 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 RPS6KA1Q15418 735 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 SMTNL2Q2TAL5 461 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 KCNT1Q5JUK3 1230 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 CMTM8Q8IZV2 173 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 GJD3Q8N144 294 aa19.65■□□□□ 0.74
TNFRSF1A-213ENST00000540022 ALG3Q92685 438 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms