RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 NELL1Q92832 810 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 EXOC4Q96A65 974 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 FCRL2Q96LA5 508 aaPredicted RBP19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 SLC2A13Q96QE2 648 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 ARHGEF4Q9NR80 690 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 WDR35Q9P2L0 1181 aa19.07■□□□□ 0.64
SNRPA1-203ENST00000540017 CHURC1-FNTBB4DL54 471 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 K7ESF4 209 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 GFRA2O00451 464 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 CAPN9O14815 690 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 SERPINC1P01008 464 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 PENKP01210 267 aaPredicted RBP19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 IGLV3-25P01717 112 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 CHKAP35790 457 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 FANCCQ00597 558 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 SLC6A3Q01959 620 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 ARID5AQ03989 594 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 RING1Q06587 406 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 DMWDQ09019 674 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 FILIP1LQ4L180 1135 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 NAA35Q5VZE5 725 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 ZNF677Q86XU0 584 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 DEFB106AQ8N104 65 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 CPXM2Q8N436 756 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 USP33Q8TEY7 942 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 BAP1Q92560 729 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 SLC39A13Q96H72 371 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 PCDHB18PQ96TA0 734 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 SYNCQ9H7C4 482 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 DNAJC17Q9NVM6 304 aaKnown RBP19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 ASNSD1Q9NWL6 643 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 DEC1Q9P2X7 70 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 STOML2Q9UJZ1 356 aa19.06■□□□□ 0.64
SNRPA1-203ENST00000540017 GOLGA6L7A0A1B0GV03 622 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 A0A1W2PQC6 194 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 TSPAN3O60637 253 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 PAPSS2O95340 614 aaPredicted RBP19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 LSM8O95777 96 aaKnown RBP19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 CAVIN2O95810 425 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 CYP1A1P04798 512 aaPredicted RBP19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 APODP05090 189 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 GLI1P08151 1106 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 CISD3P0C7P0 127 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 GRIA2P42262 883 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 EIF4EBP2Q13542 120 aaPredicted RBP19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 C2orf27AQ580R0 203 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 DCAF6Q58WW2 860 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 EFHC1Q5JVL4 640 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 TOGARAM2Q6ZUX3 1019 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 SLC26A9Q7LBE3 791 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 ERICH1Q86X53 443 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 XYLT1Q86Y38 959 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 IPO4Q8TEX9 1081 aaKnown RBP19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 SERPINB11Q96P15 392 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 ZDHHC4Q9NPG8 344 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 FBXO10Q9UK96 956 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 HCN2Q9UL51 889 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 CLEC4EQ9ULY5 219 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 TLR6Q9Y2C9 796 aa19.05■□□□□ 0.64
SNRPA1-203ENST00000540017 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 IRAK2O43187 625 aa19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 HSF2BPO75031 334 aa19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 TRUB2O95900 331 aaKnown RBP19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 SLC6A4P31645 630 aa19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 KIR2DL1P43626 348 aaPredicted RBP19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 SGSHP51688 502 aa19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 NNTQ13423 1086 aa19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 ADGRF1Q5T601 910 aa19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 NADSYN1Q6IA69 706 aa19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 GRAMD4Q6IC98 578 aa19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 CACNA2D4Q7Z3S7 1137 aa19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 TERB1Q8NA31 727 aa19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 C18orf8Q96DM3 657 aa19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 XPO6Q96QU8 1125 aaKnown RBP19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 TRIM62Q9BVG3 475 aa19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 ADAM33Q9BZ11 813 aa19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 XPO7Q9UIA9 1087 aaKnown RBP19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 DMDP11532 3685 aa19.04■□□□□ 0.64
SNRPA1-203ENST00000540017 FANCMQ8IYD8 2048 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 TBC1D3BA6NDS4 549 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 PRRT4C9JH25 899 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 PROB1E7EW31 1015 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 ACSL4O60488 711 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 ATG13O75143 517 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 LATS1O95835 1130 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 TNFRSF4P43489 277 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 SNX16P57768 344 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 TPM4P67936 248 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 FAM133BQ5BKY9 247 aaKnown RBP19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 ZC3H12AQ5D1E8 599 aaKnown RBP19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 NUGGCQ68CJ6 796 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 RFWD3Q6PCD5 774 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 IRF2BP2Q7Z5L9 587 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 UNC45BQ8IWX7 931 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 CCDC33Q8N5R6 958 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 ZBTB44Q8NCP5 570 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 ZNF397Q8NF99 534 aaPredicted RBP19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 SLC30A5Q8TAD4 765 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 OLIG1Q8TAK6 271 aa19.03■□□□□ 0.64
SNRPA1-203ENST00000540017 MYEOVQ96EZ4 313 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms