RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 PLA2G2AP14555 144 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 JUPP14923 745 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 PRKCHP24723 683 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 ACSL1P33121 698 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 CCT8P50990 548 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 CYP2J2P51589 502 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 AP3M2P53677 418 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 EIF4HQ15056 248 aaKnown RBP12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 ZNF699Q32M78 642 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 C10orf120Q5SQS8 335 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 GPRIN1Q7Z2K8 1008 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 ANKS1BQ7Z6G8 1248 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 TADA2BQ86TJ2 420 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 UNC93AQ86WB7 457 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 OR2T3Q8NH03 318 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 NXPE2Q96DL1 559 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 DCLK3Q9C098 648 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 FTSJ1Q9UET6 329 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 PCDHGA1Q9Y5H4 931 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 PCDHA5Q9Y5H7 936 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 RAI2Q9Y5P3 530 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 CFAP46Q8IYW2 2715 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 MYH10P35580 1976 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 HHLA1C9JL84 531 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 RRP8O43159 456 aaKnown RBP12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 PAPSS1O43252 624 aaPredicted RBP12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 TSPAN3O60637 253 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 CYBBP04839 570 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 FAM200BP0CF97 657 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 CDK4P11802 303 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 P4HA1P13674 534 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 CD27P26842 260 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 CTSKP43235 329 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 PSEN1P49768 467 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 NDST1P52848 882 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 COG7P83436 770 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 BIRC3Q13489 604 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 CAMK2GQ13555 558 aaPredicted RBP12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 NCOA4Q13772 614 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 INAVAQ3KP66 663 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 C6orf118Q5T5N4 469 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 SERPINA13PQ6UXR4 307 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 SCARA5Q6ZMJ2 495 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 CLEC20AQ6ZU45 233 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 CACUL1Q86Y37 369 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 PDILTQ8N807 584 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 C12orf29Q8N999 325 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 SORCS1Q8WY21 1168 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 BIRC7Q96CA5 298 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 HNRNPABQ99729 332 aaKnown RBP12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 SLC2A11Q9BYW1 496 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 CIPCQ9C0C6 399 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 LHX5Q9H2C1 402 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 TNMDQ9H2S6 317 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 PNPLA8Q9NP80 782 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 FAM49BQ9NUQ9 324 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 KBTBD4Q9NVX7 518 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 NAGPAQ9UK23 515 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 CLEC4EQ9ULY5 219 aa12.21□□□□□ -0.45
CLSTN3-209ENST00000539982 TENM4Q6N022 2769 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 CKAP5Q14008 2032 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 CAPN9O14815 690 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 TLX3O43711 291 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 CLSTN1O94985 981 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 CD2BP2O95400 341 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 SEMA4FO95754 770 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 C4BPAP04003 597 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 C1SP09871 688 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 RALAP11233 206 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 ADORA2BP29275 332 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 HNF1BP35680 557 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 CASP4P49662 377 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 CLDN10P78369 228 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 SEMG2Q02383 582 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 CEBPZQ03701 1054 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 ARID5AQ03989 594 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 SGSM1Q2NKQ1 1148 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 KCNT1Q5JUK3 1230 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 TMEM215Q68D42 235 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 SCD5Q86SK9 330 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 C12orf56Q8IXR9 622 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 ZNF843Q8N446 348 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 PLEKHO2Q8TD55 490 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 ELMO3Q96BJ8 720 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 CDK5RAP1Q96SZ6 601 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 NRSN2Q9GZP1 204 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 BTBD1Q9H0C5 482 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 CLIC5Q9NZA1 410 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 CGNQ9P2M7 1197 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 AGO1Q9UL18 857 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 AK5Q9Y6K8 562 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 MORC2Q9Y6X9 1032 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 TMEM131Q92545 1883 aa12.2□□□□□ -0.46
CLSTN3-209ENST00000539982 ZNF462Q96JM2 2506 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 UBE4BO95155 1302 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 A0A1B0GTQ1 180 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 EXOC3O60645 756 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 FSBPO95073 299 aa12.19□□□□□ -0.46
CLSTN3-209ENST00000539982 VNN1O95497 513 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms