RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 USP1O94782 785 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 CDK14O94921 469 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 SNAPINO95295 136 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 WDPCPO95876 746 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 BCL10O95999 233 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 ASS1P00966 412 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 CD4P01730 458 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 JUNP05412 331 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 KRT8P05787 483 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 PGK2P07205 417 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 SNRPAP09012 282 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 TFPTP0C1Z6 253 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 MCF2P10911 925 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 MTHFD1P11586 935 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 RAG1P15918 1043 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 CCNA2P20248 432 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 GARTP22102 1010 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 CA4P22748 312 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 PROZP22891 400 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 DNAJB2P25686 324 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 PSMA4P25789 261 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 CD40LGP29965 261 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 HPCAL1P37235 193 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 COILP38432 576 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 STAT3P40763 770 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 STAT1P42224 750 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 MAGEA11P43364 429 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 PTPN9P43378 593 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 PHKA1P46020 1223 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 HAAOP46952 286 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 LEPRP48357 1165 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 HARS2P49590 506 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 NT5C2P49902 561 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 PMS1P54277 932 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 YWHAGP61981 247 aaKnown RBP eCLIP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 UBXN2AP68543 259 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 NFATC3Q12968 1075 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 ACAP1Q15027 740 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 PRKD1Q15139 912 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 SMU1Q2TAY7 513 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 ESCO2Q56NI9 601 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 PLEKHG4Q58EX7 1191 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 FAM47CQ5HY64 1035 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 RABGAP1LQ5R372 815 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 TTC38Q5R3I4 469 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 TEDDM1Q5T9Z0 273 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 PLEKHA7Q6IQ23 1121 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 OGFOD2Q6N063 350 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 UGT3A1Q6NUS8 523 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 GPR153Q6NV75 609 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 ALKBH5Q6P6C2 394 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 SHQ1Q6PI26 577 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 RNF111Q6ZNA4 994 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 ZNF704Q6ZNC4 412 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 ILDR2Q71H61 639 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 ZNF767PQ75MW2 155 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 TTC7BQ86TV6 843 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 METTL3Q86U44 580 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 FAM83AQ86UY5 434 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 HORMAD1Q86X24 394 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 RALGPS2Q86X27 583 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 SNX32Q86XE0 403 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 ARMC8Q8IUR7 673 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 TBC1D10CQ8IV04 446 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 LIX1LQ8IVB5 337 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 HERC6Q8IVU3 1022 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 ZC3H3Q8IXZ2 948 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 TCAIMQ8N3R3 496 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 ZNF276Q8N554 614 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 SLC15A4Q8N697 577 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 ANKRD13CQ8N6S4 541 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 ABTB2Q8N961 1025 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 SLC26A7Q8TE54 656 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 FNIP1Q8TF40 1166 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 SEPT8Q92599 483 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 TNFRSF25Q93038 417 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 VTI1AQ96AJ9 217 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 C18orf8Q96DM3 657 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 EDC3Q96F86 508 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 DUS3LQ96G46 650 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 RIPOR3Q96MK2 946 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 ASB2Q96Q27 587 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 GCNAQ96QF7 691 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 CYTH2Q99418 400 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 SORT1Q99523 831 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 SLC29A1Q99808 456 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 SPOCK3Q9BQ16 436 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 TMUB1Q9BVT8 246 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 KIFC1Q9BW19 673 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 NUP85Q9BW27 656 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 CCDC106Q9BWC9 280 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 C6orf62Q9GZU0 229 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 DHX33Q9H6R0 707 aaKnown RBP6.32□□□□□ -1.4
SNHG1-211ENST00000539921 MANSC1Q9H8J5 431 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 MMRN2Q9H8L6 949 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 CXorf21Q9HAI6 301 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 KCNK13Q9HB14 408 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 TM9SF3Q9HD45 589 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 SLCO1B3Q9NPD5 702 aa6.32□□□□□ -1.4
SNHG1-211ENST00000539921 CD320Q9NPF0 282 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms