RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 CCDC183Q5T5S1 534 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 RBM43Q6ZSC3 357 aaKnown RBP15.73■□□□□ 0.11
USB1-203ENST00000539737 SV2AQ7L0J3 742 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 PDZD3Q86UT5 571 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 NAXDQ8IW45 347 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 FUKQ8N0W3 1084 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 TAF4BQ92750 862 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 MRGPRX1Q96LB2 322 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 DUSP9Q99956 384 aaKnown RBP15.73■□□□□ 0.11
USB1-203ENST00000539737 BBS2Q9BXC9 721 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 NACA2Q9H009 215 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 MIR1-1HGQ9H1L0 117 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 NMUR1Q9HB89 426 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 FAM49BQ9NUQ9 324 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 TBC1D14Q9P2M4 693 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 RAXQ9Y2V3 346 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 GOLGA4Q13439 2230 aaKnown RBP15.73■□□□□ 0.11
USB1-203ENST00000539737 ASXL3Q9C0F0 2248 aa15.73■□□□□ 0.11
USB1-203ENST00000539737 UPK3BL1B0FP48 263 aa15.72■□□□□ 0.11
USB1-203ENST00000539737 KCNJ18B7U540 433 aa15.72■□□□□ 0.11
USB1-203ENST00000539737 UPK3BL2E5RIL1 263 aa15.72■□□□□ 0.11
USB1-203ENST00000539737 CYP26A1O43174 497 aa15.72■□□□□ 0.11
USB1-203ENST00000539737 TLR5O60602 858 aa15.72■□□□□ 0.11
USB1-203ENST00000539737 ZDHHC11BP0C7U3 371 aa15.72■□□□□ 0.11
USB1-203ENST00000539737 GCLMP48507 274 aa15.72■□□□□ 0.11
USB1-203ENST00000539737 STX17P56962 302 aa15.72■□□□□ 0.11
USB1-203ENST00000539737 MAP3K7CLP57077 242 aa15.72■□□□□ 0.11
USB1-203ENST00000539737 TCERG1LQ5VWI1 586 aa15.72■□□□□ 0.11
USB1-203ENST00000539737 KRT39Q6A163 491 aa15.72■□□□□ 0.11
USB1-203ENST00000539737 SPOPLQ6IQ16 392 aa15.72■□□□□ 0.11
USB1-203ENST00000539737 DDX42Q86XP3 938 aaKnown RBP eCLIP15.72■□□□□ 0.11
USB1-203ENST00000539737 C12orf29Q8N999 325 aa15.72■□□□□ 0.11
USB1-203ENST00000539737 CCDC150Q8NCX0 1101 aa15.72■□□□□ 0.11
USB1-203ENST00000539737 TNIP3Q96KP6 325 aa15.72■□□□□ 0.11
USB1-203ENST00000539737 KLF16Q9BXK1 252 aaPredicted RBP15.72■□□□□ 0.11
USB1-203ENST00000539737 DNAAF2Q9NVR5 837 aaKnown RBP15.72■□□□□ 0.11
USB1-203ENST00000539737 RTN3O95197 1032 aaPredicted RBP15.71■□□□□ 0.11
USB1-203ENST00000539737 VNN1O95497 513 aa15.71■□□□□ 0.11
USB1-203ENST00000539737 HLA-DRAP01903 254 aa15.71■□□□□ 0.11
USB1-203ENST00000539737 CISD3P0C7P0 127 aa15.71■□□□□ 0.11
USB1-203ENST00000539737 ADORA2BP29275 332 aa15.71■□□□□ 0.11
USB1-203ENST00000539737 PPP3CAQ08209 521 aa15.71■□□□□ 0.11
USB1-203ENST00000539737 BYSLQ13895 437 aaKnown RBP15.71■□□□□ 0.11
USB1-203ENST00000539737 SGSM1Q2NKQ1 1148 aa15.71■□□□□ 0.11
USB1-203ENST00000539737 DPCR1Q3MIW9 517 aa15.71■□□□□ 0.11
USB1-203ENST00000539737 CT47A1Q5JQC4 288 aaPredicted RBP15.71■□□□□ 0.11
USB1-203ENST00000539737 LAYNQ6UX15 382 aa15.71■□□□□ 0.11
USB1-203ENST00000539737 SLC36A4Q6YBV0 504 aa15.71■□□□□ 0.11
USB1-203ENST00000539737 CEP76Q8TAP6 659 aa15.71■□□□□ 0.11
USB1-203ENST00000539737 SLC2A14Q8TDB8 520 aa15.71■□□□□ 0.11
USB1-203ENST00000539737 SORCS1Q8WY21 1168 aa15.71■□□□□ 0.11
USB1-203ENST00000539737 TOE1Q96GM8 510 aaKnown RBP15.71■□□□□ 0.11
USB1-203ENST00000539737 TWNKQ96RR1 684 aa15.71■□□□□ 0.11
USB1-203ENST00000539737 GPR174Q9BXC1 333 aa15.71■□□□□ 0.11
USB1-203ENST00000539737 MMRN2Q9H8L6 949 aa15.71■□□□□ 0.11
USB1-203ENST00000539737 DMAP1Q9NPF5 467 aaPredicted RBP15.71■□□□□ 0.11
USB1-203ENST00000539737 CLEC4EQ9ULY5 219 aa15.71■□□□□ 0.11
USB1-203ENST00000539737 FNDC3AQ9Y2H6 1198 aaKnown RBP15.71■□□□□ 0.11
USB1-203ENST00000539737 FAM149AA5PLN7 773 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 FAM221BA6H8Z2 402 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 CACNG3O60359 315 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 NDUFS2O75306 463 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 ASS1P00966 412 aaKnown RBP15.7■□□□□ 0.1
USB1-203ENST00000539737 HMBSP08397 361 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 ERCC5P28715 1186 aaPredicted RBP15.7■□□□□ 0.1
USB1-203ENST00000539737 CLDN6P56747 220 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 GEN1Q17RS7 908 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 ZNF423Q2M1K9 1284 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 FUT11Q495W5 492 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 CCDC157Q569K6 752 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 SPDYCQ5MJ68 293 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 FAM124AQ86V42 546 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 PDZD8Q8NEN9 1154 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 SETD7Q8WTS6 366 aaKnown RBP15.7■□□□□ 0.1
USB1-203ENST00000539737 SLC35C1Q96A29 364 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 ZNF419Q96HQ0 510 aaPredicted RBP15.7■□□□□ 0.1
USB1-203ENST00000539737 GABRG3Q99928 467 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 MKRN2Q9H000 416 aaKnown RBP15.7■□□□□ 0.1
USB1-203ENST00000539737 IL37Q9NZH6 218 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 BTBD3Q9Y2F9 522 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 PCDHB9Q9Y5E1 797 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 STON1Q9Y6Q2 735 aa15.7■□□□□ 0.1
USB1-203ENST00000539737 TMEM131Q92545 1883 aa15.69■□□□□ 0.1
USB1-203ENST00000539737 A0A1W2PQH9 124 aa15.69■□□□□ 0.1
USB1-203ENST00000539737 MEI4A8MW99 385 aa15.69■□□□□ 0.1
USB1-203ENST00000539737 KCNK3O14649 394 aa15.69■□□□□ 0.1
USB1-203ENST00000539737 ATXN1LP0C7T5 689 aaKnown RBP15.69■□□□□ 0.1
USB1-203ENST00000539737 HOXD12P35452 270 aa15.69■□□□□ 0.1
USB1-203ENST00000539737 IL12RB1P42701 662 aa15.69■□□□□ 0.1
USB1-203ENST00000539737 MARSP56192 900 aaKnown RBP15.69■□□□□ 0.1
USB1-203ENST00000539737 TPD52L1Q16890 204 aaPredicted RBP15.69■□□□□ 0.1
USB1-203ENST00000539737 SNX30Q5VWJ9 437 aa15.69■□□□□ 0.1
USB1-203ENST00000539737 SASS6Q6UVJ0 657 aa15.69■□□□□ 0.1
USB1-203ENST00000539737 CCNI2Q6ZMN8 369 aaPredicted RBP15.69■□□□□ 0.1
USB1-203ENST00000539737 TRMT11Q7Z4G4 463 aaKnown RBP15.69■□□□□ 0.1
USB1-203ENST00000539737 FBXL13Q8NEE6 735 aa15.69■□□□□ 0.1
USB1-203ENST00000539737 TAS1R2Q8TE23 839 aa15.69■□□□□ 0.1
USB1-203ENST00000539737 ADAMTS14Q8WXS8 1223 aa15.69■□□□□ 0.1
USB1-203ENST00000539737 SMARCD1Q96GM5 515 aa15.69■□□□□ 0.1
USB1-203ENST00000539737 LRIG1Q96JA1 1093 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms