RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 KCTD15Q96SI1 283 aaPredicted RBP16.78■□□□□ 0.28
TRAF3-204ENST00000539721 HERPUD2Q9BSE4 406 aa16.78■□□□□ 0.28
TRAF3-204ENST00000539721 NACA2Q9H009 215 aa16.78■□□□□ 0.28
TRAF3-204ENST00000539721 TKTL2Q9H0I9 626 aa16.78■□□□□ 0.28
TRAF3-204ENST00000539721 TLR6Q9Y2C9 796 aa16.78■□□□□ 0.28
TRAF3-204ENST00000539721 PDE4DIPQ5VU43 2346 aa16.78■□□□□ 0.28
TRAF3-204ENST00000539721 DENND4CQ5VZ89 1909 aa16.78■□□□□ 0.28
TRAF3-204ENST00000539721 RFPL2O75678 378 aa16.77■□□□□ 0.28
TRAF3-204ENST00000539721 F11P03951 625 aa16.77■□□□□ 0.28
TRAF3-204ENST00000539721 L1CAMP32004 1257 aa16.77■□□□□ 0.28
TRAF3-204ENST00000539721 CCR1P32246 355 aa16.77■□□□□ 0.28
TRAF3-204ENST00000539721 ATP5C1P36542 298 aaKnown RBP16.77■□□□□ 0.28
TRAF3-204ENST00000539721 NRIP1P48552 1158 aa16.77■□□□□ 0.28
TRAF3-204ENST00000539721 TBX4P57082 545 aa16.77■□□□□ 0.28
TRAF3-204ENST00000539721 ITIH3Q06033 890 aa16.77■□□□□ 0.28
TRAF3-204ENST00000539721 SCAPQ12770 1279 aa16.77■□□□□ 0.28
TRAF3-204ENST00000539721 NNTQ13423 1086 aa16.77■□□□□ 0.28
TRAF3-204ENST00000539721 DUSP6Q16828 381 aa16.77■□□□□ 0.28
TRAF3-204ENST00000539721 TMC8Q8IU68 726 aa16.77■□□□□ 0.28
TRAF3-204ENST00000539721 HS6ST3Q8IZP7 471 aa16.77■□□□□ 0.28
TRAF3-204ENST00000539721 CORO1BQ9BR76 489 aa16.77■□□□□ 0.28
TRAF3-204ENST00000539721 IL21Q9HBE4 155 aa16.77■□□□□ 0.28
TRAF3-204ENST00000539721 ASAH2Q9NR71 780 aa16.77■□□□□ 0.28
TRAF3-204ENST00000539721 RBM12Q9NTZ6 932 aaKnown RBP16.77■□□□□ 0.28
TRAF3-204ENST00000539721 GOLGA6L10A0A0M3HER8 536 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 TCRBV7S2A1N4TA0A589 114 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 SLC12A8A0AV02 714 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 HNRNPA1P09651 372 aaKnown RBP eCLIP16.77■□□□□ 0.27
TRAF3-204ENST00000539721 GABRR2P28476 465 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 HOXA9P31269 272 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 TUBP50607 506 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 MMRN1Q13201 1228 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 PPP2R5DQ14738 602 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 TRIP4Q15650 581 aaPredicted RBP16.77■□□□□ 0.27
TRAF3-204ENST00000539721 TAZQ16635 292 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 TMEM150AQ86TG1 271 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 RFX6Q8HWS3 928 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 PYROXD2Q8N2H3 581 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 MYRIPQ8NFW9 859 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 FAM71BQ8TC56 605 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 MRPL38Q96DV4 380 aaKnown RBP16.77■□□□□ 0.27
TRAF3-204ENST00000539721 GCNAQ96QF7 691 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 LRRC3Q9BY71 257 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 MAGEB5Q9BZ81 275 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 ANLNQ9NQW6 1124 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.77■□□□□ 0.27
TRAF3-204ENST00000539721 MTMR10Q9NXD2 777 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 ARHGEF38Q9NXL2 777 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 DNMT3LQ9UJW3 386 aa16.77■□□□□ 0.27
TRAF3-204ENST00000539721 EFCAB8A8MWE9 144 aa16.76■□□□□ 0.27
TRAF3-204ENST00000539721 COCHO43405 550 aa16.76■□□□□ 0.27
TRAF3-204ENST00000539721 XYLBO75191 536 aa16.76■□□□□ 0.27
TRAF3-204ENST00000539721 TJP3O95049 919 aa16.76■□□□□ 0.27
TRAF3-204ENST00000539721 SLC2A3P11169 496 aa16.76■□□□□ 0.27
TRAF3-204ENST00000539721 MYL4P12829 197 aa16.76■□□□□ 0.27
TRAF3-204ENST00000539721 PPP2R3CQ969Q6 453 aa16.76■□□□□ 0.27
TRAF3-204ENST00000539721 SLC39A13Q96H72 371 aa16.76■□□□□ 0.27
TRAF3-204ENST00000539721 FCRL2Q96LA5 508 aaPredicted RBP16.76■□□□□ 0.27
TRAF3-204ENST00000539721 ZNF670Q9BS34 389 aa16.76■□□□□ 0.27
TRAF3-204ENST00000539721 MAK16Q9BXY0 300 aaKnown RBP16.76■□□□□ 0.27
TRAF3-204ENST00000539721 TRPC7Q9HCX4 862 aa16.76■□□□□ 0.27
TRAF3-204ENST00000539721 EFR3BQ9Y2G0 817 aa16.76■□□□□ 0.27
TRAF3-204ENST00000539721 C2orf78A6NCI8 922 aa16.75■□□□□ 0.27
TRAF3-204ENST00000539721 CCDC188H7C350 402 aa16.75■□□□□ 0.27
TRAF3-204ENST00000539721 I6L893 689 aaPredicted RBP16.75■□□□□ 0.27
TRAF3-204ENST00000539721 MOCS2O96007 188 aaPredicted RBP16.75■□□□□ 0.27
TRAF3-204ENST00000539721 OAS1P00973 400 aaKnown RBP16.75■□□□□ 0.27
TRAF3-204ENST00000539721 APOEP02649 317 aa16.75■□□□□ 0.27
TRAF3-204ENST00000539721 HMBSP08397 361 aa16.75■□□□□ 0.27
TRAF3-204ENST00000539721 PTPN2P17706 415 aa16.75■□□□□ 0.27
TRAF3-204ENST00000539721 CDC25CP30307 473 aa16.75■□□□□ 0.27
TRAF3-204ENST00000539721 ARL4AP40617 200 aa16.75■□□□□ 0.27
TRAF3-204ENST00000539721 KPNA1P52294 538 aaPredicted RBP16.75■□□□□ 0.27
TRAF3-204ENST00000539721 KLF1Q13351 362 aaPredicted RBP16.75■□□□□ 0.27
TRAF3-204ENST00000539721 TEX35Q5T0J7 233 aa16.75■□□□□ 0.27
TRAF3-204ENST00000539721 ZNF697Q5TEC3 545 aa16.75■□□□□ 0.27
TRAF3-204ENST00000539721 KLHDC10Q6PID8 442 aa16.75■□□□□ 0.27
TRAF3-204ENST00000539721 VSIG1Q86XK7 387 aa16.75■□□□□ 0.27
TRAF3-204ENST00000539721 MRPS31Q92665 395 aaKnown RBP16.75■□□□□ 0.27
TRAF3-204ENST00000539721 HCFC1R1Q9NWW0 138 aa16.75■□□□□ 0.27
TRAF3-204ENST00000539721 ZDHHC7Q9NXF8 308 aa16.75■□□□□ 0.27
TRAF3-204ENST00000539721 HBS1LQ9Y450 684 aaKnown RBP16.75■□□□□ 0.27
TRAF3-204ENST00000539721 NR2E1Q9Y466 385 aa16.75■□□□□ 0.27
TRAF3-204ENST00000539721 CREB3O43889 395 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 DYNLT1P63172 113 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 CYP4F8P98187 520 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 ADCY2Q08462 1091 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 SIX1Q15475 284 aaPredicted RBP16.74■□□□□ 0.27
TRAF3-204ENST00000539721 ANKRD20A8PQ5CZ79 823 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 GAREM2Q75VX8 874 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 KLHL7Q8IXQ5 586 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 ZDHHC14Q8IZN3 488 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 NOA1Q8NC60 698 aaKnown RBP16.74■□□□□ 0.27
TRAF3-204ENST00000539721 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.74■□□□□ 0.27
TRAF3-204ENST00000539721 TSC1Q92574 1164 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 RNF157Q96PX1 679 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 CDCA3Q99618 268 aaPredicted RBP16.74■□□□□ 0.27
TRAF3-204ENST00000539721 ATXN3LQ9H3M9 355 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 ZNF576Q9H609 170 aa16.74■□□□□ 0.27
TRAF3-204ENST00000539721 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms