RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 HSFY1Q96LI6 401 aa17.53■□□□□ 0.4
DDB1-215ENST00000539712 GABRG3Q99928 467 aa17.53■□□□□ 0.4
DDB1-215ENST00000539712 POLMQ9NP87 494 aaPredicted RBP17.53■□□□□ 0.4
DDB1-215ENST00000539712 ABCC13Q9NSE7 274 aa17.53■□□□□ 0.4
DDB1-215ENST00000539712 OLA1Q9NTK5 396 aaKnown RBP17.53■□□□□ 0.4
DDB1-215ENST00000539712 MBD1Q9UIS9 605 aaPredicted RBP17.53■□□□□ 0.4
DDB1-215ENST00000539712 CDV3Q9UKY7 258 aaKnown RBP17.53■□□□□ 0.4
DDB1-215ENST00000539712 HBS1LQ9Y450 684 aaKnown RBP17.53■□□□□ 0.4
DDB1-215ENST00000539712 GON4LQ3T8J9 2241 aa17.53■□□□□ 0.4
DDB1-215ENST00000539712 CNOT1A5YKK6 2376 aaKnown RBP17.53■□□□□ 0.4
DDB1-215ENST00000539712 TCRBV21S2A2A0A5A6 115 aa17.52■□□□□ 0.4
DDB1-215ENST00000539712 BCLAF3A2AJT9 711 aaKnown RBP17.52■□□□□ 0.4
DDB1-215ENST00000539712 BECN2A8MW95 431 aa17.52■□□□□ 0.4
DDB1-215ENST00000539712 SLC30A4O14863 429 aa17.52■□□□□ 0.4
DDB1-215ENST00000539712 MSI1O43347 362 aaKnown RBP17.52■□□□□ 0.4
DDB1-215ENST00000539712 ALDH1A2O94788 518 aa17.52■□□□□ 0.4
DDB1-215ENST00000539712 RHOBTB1O94844 696 aa17.52■□□□□ 0.4
DDB1-215ENST00000539712 IGLV3-27P01718 113 aa17.52■□□□□ 0.4
DDB1-215ENST00000539712 GABRG2P18507 467 aa17.52■□□□□ 0.4
DDB1-215ENST00000539712 SDHBP21912 280 aa17.52■□□□□ 0.4
DDB1-215ENST00000539712 MPLP40238 635 aa17.52■□□□□ 0.4
DDB1-215ENST00000539712 GEN1Q17RS7 908 aa17.52■□□□□ 0.4
DDB1-215ENST00000539712 DPCR1Q3MIW9 517 aa17.52■□□□□ 0.4
DDB1-215ENST00000539712 DPY19L2P1Q6NXN4 242 aa17.52■□□□□ 0.4
DDB1-215ENST00000539712 NUDT18Q6ZVK8 323 aa17.52■□□□□ 0.4
DDB1-215ENST00000539712 TRMT11Q7Z4G4 463 aaKnown RBP17.52■□□□□ 0.4
DDB1-215ENST00000539712 NETO1Q8TDF5 533 aa17.52■□□□□ 0.4
DDB1-215ENST00000539712 HMGB4Q8WW32 186 aa17.52■□□□□ 0.4
DDB1-215ENST00000539712 CYTH4Q9UIA0 394 aa17.52■□□□□ 0.4
DDB1-215ENST00000539712 DCDC2BA2VCK2 349 aa17.51■□□□□ 0.39
DDB1-215ENST00000539712 WASH3PC4AMC7 463 aa17.51■□□□□ 0.39
DDB1-215ENST00000539712 HOXB2P14652 356 aa17.51■□□□□ 0.39
DDB1-215ENST00000539712 PON1P27169 355 aa17.51■□□□□ 0.39
DDB1-215ENST00000539712 GBP1P32455 592 aa17.51■□□□□ 0.39
DDB1-215ENST00000539712 ELF2Q15723 593 aa17.51■□□□□ 0.39
DDB1-215ENST00000539712 TCEAL6Q6IPX3 200 aa17.51■□□□□ 0.39
DDB1-215ENST00000539712 SCUBE3Q8IX30 993 aa17.51■□□□□ 0.39
DDB1-215ENST00000539712 RNF139Q8WU17 664 aa17.51■□□□□ 0.39
DDB1-215ENST00000539712 ZNF606Q8WXB4 792 aa17.51■□□□□ 0.39
DDB1-215ENST00000539712 TCEAL3Q969E4 200 aa17.51■□□□□ 0.39
DDB1-215ENST00000539712 RTKNQ9BST9 563 aa17.51■□□□□ 0.39
DDB1-215ENST00000539712 SLC4A5Q9BY07 1137 aa17.51■□□□□ 0.39
DDB1-215ENST00000539712 SIX2Q9NPC8 291 aa17.51■□□□□ 0.39
DDB1-215ENST00000539712 CACNA2D2Q9NY47 1150 aa17.51■□□□□ 0.39
DDB1-215ENST00000539712 AJAP1Q9UKB5 411 aaPredicted RBP17.51■□□□□ 0.39
DDB1-215ENST00000539712 THADAQ6YHU6 1953 aa17.51■□□□□ 0.39
DDB1-215ENST00000539712 GTPBP10A4D1E9 387 aaKnown RBP17.5■□□□□ 0.39
DDB1-215ENST00000539712 TM4SF5O14894 197 aa17.5■□□□□ 0.39
DDB1-215ENST00000539712 FOXD2O60548 495 aaPredicted RBP17.5■□□□□ 0.39
DDB1-215ENST00000539712 LTFP02788 710 aa17.5■□□□□ 0.39
DDB1-215ENST00000539712 KRT5P13647 590 aa17.5■□□□□ 0.39
DDB1-215ENST00000539712 HOXD9P28356 352 aaPredicted RBP17.5■□□□□ 0.39
DDB1-215ENST00000539712 ENPP2Q13822 863 aa17.5■□□□□ 0.39
DDB1-215ENST00000539712 TMEM215Q68D42 235 aa17.5■□□□□ 0.39
DDB1-215ENST00000539712 C11orf74Q86VG3 221 aa17.5■□□□□ 0.39
DDB1-215ENST00000539712 CHPFQ8IZ52 775 aa17.5■□□□□ 0.39
DDB1-215ENST00000539712 STK32AQ8WU08 396 aa17.5■□□□□ 0.39
DDB1-215ENST00000539712 MIS12Q9H081 205 aa17.5■□□□□ 0.39
DDB1-215ENST00000539712 VPS45Q9NRW7 570 aa17.5■□□□□ 0.39
DDB1-215ENST00000539712 LMBRD1Q9NUN5 540 aa17.5■□□□□ 0.39
DDB1-215ENST00000539712 RAD54BQ9Y620 910 aa17.5■□□□□ 0.39
DDB1-215ENST00000539712 PLXND1Q9Y4D7 1925 aa17.5■□□□□ 0.39
DDB1-215ENST00000539712 NUP205Q92621 2012 aa17.5■□□□□ 0.39
DDB1-215ENST00000539712 FBXO21O94952 628 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 LETM1O95202 739 aaPredicted RBP17.49■□□□□ 0.39
DDB1-215ENST00000539712 HARS2P49590 506 aaKnown RBP17.49■□□□□ 0.39
DDB1-215ENST00000539712 SGSHP51688 502 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 LIMK1P53667 647 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 CREB5Q02930 508 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 MEA1Q16626 185 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 ADGRF1Q5T601 910 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 RNF43Q68DV7 783 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 GBP6Q6ZN66 633 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 ENOSF1Q7L5Y1 443 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 TMEM110Q86TL2 294 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 CREBRFQ8IUR6 639 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 WDTC1Q8N5D0 677 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 IPO4Q8TEX9 1081 aaKnown RBP17.49■□□□□ 0.39
DDB1-215ENST00000539712 SHC3Q92529 594 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 ERLEC1Q96DZ1 483 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 SLC2A11Q9BYW1 496 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 THAP9Q9H5L6 903 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 CALCOCO1Q9P1Z2 691 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 BCCIPQ9P287 314 aaKnown RBP eCLIP17.49■□□□□ 0.39
DDB1-215ENST00000539712 THAP10Q9P2Z0 257 aaPredicted RBP17.49■□□□□ 0.39
DDB1-215ENST00000539712 APEX2Q9UBZ4 518 aa17.49■□□□□ 0.39
DDB1-215ENST00000539712 PAPSS1O43252 624 aaPredicted RBP17.48■□□□□ 0.39
DDB1-215ENST00000539712 TSPAN3O60637 253 aa17.48■□□□□ 0.39
DDB1-215ENST00000539712 CAVIN2O95810 425 aa17.48■□□□□ 0.39
DDB1-215ENST00000539712 LATS1O95835 1130 aa17.48■□□□□ 0.39
DDB1-215ENST00000539712 NDUFV2P19404 249 aa17.48■□□□□ 0.39
DDB1-215ENST00000539712 PTGER3P43115 390 aa17.48■□□□□ 0.39
DDB1-215ENST00000539712 EXOC3L4Q17RC7 722 aa17.48■□□□□ 0.39
DDB1-215ENST00000539712 FAM133BQ5BKY9 247 aaKnown RBP17.48■□□□□ 0.39
DDB1-215ENST00000539712 MIIPQ5JXC2 388 aa17.48■□□□□ 0.39
DDB1-215ENST00000539712 DDI1Q8WTU0 396 aa17.48■□□□□ 0.39
DDB1-215ENST00000539712 SLC6A17Q9H1V8 727 aa17.48■□□□□ 0.39
DDB1-215ENST00000539712 ELOVL2Q9NXB9 296 aa17.48■□□□□ 0.39
DDB1-215ENST00000539712 NAALADL1Q9UQQ1 740 aa17.48■□□□□ 0.39
DDB1-215ENST00000539712 STON1Q9Y6Q2 735 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms