RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 JOSD2Q8TAC2 188 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 PLD4Q96BZ4 506 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 SLC39A13Q96H72 371 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 RAB6CQ9H0N0 254 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 LMAN1LQ9HAT1 526 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 PLK2Q9NYY3 685 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 TMEM59LQ9UK28 342 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 SYNJ2BP-COX16A0A087WUM0 186 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 IRAK2O43187 625 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 EGFP01133 1207 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 GLI1P08151 1106 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 ADH5P11766 374 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 HOXC13P31276 330 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 SGSHP51688 502 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 KLHL30Q0D2K2 578 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 SPECC1LQ69YQ0 1117 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 NADSYN1Q6IA69 706 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 Q6ZS52 159 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 TOGARAM2Q6ZUX3 1019 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 MON1BQ7L1V2 547 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 PHF13Q86YI8 300 aaPredicted RBP16.41■□□□□ 0.22
RPAIN-206ENST00000539417 EMC1Q8N766 993 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 CLDN23Q96B33 292 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 OTUB2Q96DC9 234 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 METTL5Q9NRN9 209 aaKnown RBP16.41■□□□□ 0.22
RPAIN-206ENST00000539417 C2orf42Q9NWW7 574 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 COX16Q9P0S2 106 aa16.41■□□□□ 0.22
RPAIN-206ENST00000539417 TCRBV5S1A1TA0A578 114 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 GFRA2O00451 464 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 TSPAN3O60637 253 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 SLC6A4P31645 630 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 NSFP46459 744 aaKnown RBP16.4■□□□□ 0.22
RPAIN-206ENST00000539417 ATXN1P54253 815 aaKnown RBP16.4■□□□□ 0.22
RPAIN-206ENST00000539417 CCINQ13939 588 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 ANO4Q32M45 955 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 ZC3H12AQ5D1E8 599 aaKnown RBP16.4■□□□□ 0.22
RPAIN-206ENST00000539417 TMEM196Q5HYL7 178 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 ACAD10Q6JQN1 1059 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 PKN3Q6P5Z2 889 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 ZDHHC17Q8IUH5 632 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 ETFBKMTQ8IXQ9 262 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 FAM217AQ8IXS0 508 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 NPY6RQ99463 290 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 P2RY13Q9BPV8 354 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 ANLNQ9NQW6 1124 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 POLR3BQ9NW08 1133 aaPredicted RBP16.4■□□□□ 0.22
RPAIN-206ENST00000539417 ADAM22Q9P0K1 906 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 CLEC4EQ9ULY5 219 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 TLR6Q9Y2C9 796 aa16.4■□□□□ 0.22
RPAIN-206ENST00000539417 LUC7L2Q9Y383 392 aaKnown RBP16.4■□□□□ 0.22
RPAIN-206ENST00000539417 KIAA1549LQ6ZVL6 1849 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 NEDD8-MDP1E9PL57 170 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 I6L893 689 aaPredicted RBP16.39■□□□□ 0.21
RPAIN-206ENST00000539417 HOXC11O43248 304 aaPredicted RBP16.39■□□□□ 0.21
RPAIN-206ENST00000539417 MOCS2O96007 188 aaPredicted RBP16.39■□□□□ 0.21
RPAIN-206ENST00000539417 CCDC172P0C7W6 258 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 MATKP42679 507 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 NR1H3Q13133 447 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 FAM133BQ5BKY9 247 aaKnown RBP16.39■□□□□ 0.21
RPAIN-206ENST00000539417 RFWD3Q6PCD5 774 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 WDR59Q6PJI9 974 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 PHTF2Q8N3S3 785 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 CD101Q93033 1021 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 MSANTD3Q96H12 275 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 SERPINB11Q96P15 392 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 TBCBQ99426 244 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 OSBPL6Q9BZF3 934 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 TRIM5Q9C035 493 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 DCLK3Q9C098 648 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 FAM204AQ9H8W3 233 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 DDIT4Q9NX09 232 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.39■□□□□ 0.21
RPAIN-206ENST00000539417 ARHGAP20Q9P2F6 1191 aa16.39■□□□□ 0.21
RPAIN-206ENST00000539417 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.39■□□□□ 0.213e-6■□□□□ 9.2
RPAIN-206ENST00000539417 ATMINO43313 823 aaPredicted RBP16.38■□□□□ 0.21
RPAIN-206ENST00000539417 ADH1CP00326 375 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 TPM3P06753 285 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 TYRP14679 529 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 NOS2P35228 1153 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 SCNN1AP37088 669 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 HARS2P49590 506 aaKnown RBP16.38■□□□□ 0.21
RPAIN-206ENST00000539417 ADKP55263 362 aaKnown RBP16.38■□□□□ 0.21
RPAIN-206ENST00000539417 SNX16P57768 344 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 CDK17Q00537 523 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 GAD2Q05329 585 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 KDSRQ06136 332 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 RING1Q06587 406 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 TBX2Q13207 712 aaPredicted RBP16.38■□□□□ 0.21
RPAIN-206ENST00000539417 NME3Q13232 169 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 SH3PXD2AQ5TCZ1 1133 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 FYB2Q5VWT5 728 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 MCOLN2Q8IZK6 566 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 DTWD2Q8NBA8 298 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 PRSS33Q8NF86 280 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 SYN2Q92777 582 aaPredicted RBP16.38■□□□□ 0.21
RPAIN-206ENST00000539417 NT5C3BQ969T7 300 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 CFAP57Q96MR6 1250 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 NELL2Q99435 816 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 BBS2Q9BXC9 721 aa16.38■□□□□ 0.21
RPAIN-206ENST00000539417 NUCKS1Q9H1E3 243 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms