RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 RRAGAQ7L523 313 aa23.22■■□□□ 1.31
SCARB1-206ENST00000539320 EDEM1Q92611 657 aa23.22■■□□□ 1.31
SCARB1-206ENST00000539320 ZSWIM1Q9BR11 485 aa23.22■■□□□ 1.31
SCARB1-206ENST00000539320 SRRTQ9BXP5 876 aaKnown RBP23.22■■□□□ 1.31
SCARB1-206ENST00000539320 INTS2Q9H0H0 1204 aaKnown RBP23.22■■□□□ 1.31
SCARB1-206ENST00000539320 CACNA2D2Q9NY47 1150 aa23.22■■□□□ 1.31
SCARB1-206ENST00000539320 CALCOCO1Q9P1Z2 691 aa23.22■■□□□ 1.31
SCARB1-206ENST00000539320 MBD1Q9UIS9 605 aaPredicted RBP23.22■■□□□ 1.31
SCARB1-206ENST00000539320 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.22■■□□□ 1.31
SCARB1-206ENST00000539320 RNF225M0QZC1 329 aaPredicted RBP23.21■■□□□ 1.31
SCARB1-206ENST00000539320 ZBTB24O43167 697 aaPredicted RBP23.21■■□□□ 1.31
SCARB1-206ENST00000539320 MAP3K13O43283 966 aa23.21■■□□□ 1.31
SCARB1-206ENST00000539320 UBE2HP62256 183 aa23.21■■□□□ 1.31
SCARB1-206ENST00000539320 CNGA2Q16280 664 aa23.21■■□□□ 1.31
SCARB1-206ENST00000539320 RNF43Q68DV7 783 aa23.21■■□□□ 1.31
SCARB1-206ENST00000539320 FAM217AQ8IXS0 508 aa23.21■■□□□ 1.31
SCARB1-206ENST00000539320 EHBP1Q8NDI1 1231 aa23.21■■□□□ 1.31
SCARB1-206ENST00000539320 IPO4Q8TEX9 1081 aaKnown RBP23.21■■□□□ 1.31
SCARB1-206ENST00000539320 ABCC13Q9NSE7 274 aa23.21■■□□□ 1.31
SCARB1-206ENST00000539320 GFRA2O00451 464 aa23.2■■□□□ 1.3
SCARB1-206ENST00000539320 FGFR1OPO95684 399 aaKnown RBP23.2■■□□□ 1.3
SCARB1-206ENST00000539320 HARS2P49590 506 aaKnown RBP23.2■■□□□ 1.3
SCARB1-206ENST00000539320 KIAA1211LQ6NV74 962 aa23.2■■□□□ 1.3
SCARB1-206ENST00000539320 PMF1Q6P1K2 205 aa23.2■■□□□ 1.3
SCARB1-206ENST00000539320 ARMCX6Q7L4S7 300 aa23.2■■□□□ 1.3
SCARB1-206ENST00000539320 ANKS1BQ7Z6G8 1248 aa23.2■■□□□ 1.3
SCARB1-206ENST00000539320 FRMD1Q8N878 549 aa23.2■■□□□ 1.3
SCARB1-206ENST00000539320 SLC35F5Q8WV83 523 aa23.2■■□□□ 1.3
SCARB1-206ENST00000539320 KREMEN1Q96MU8 473 aa23.2■■□□□ 1.3
SCARB1-206ENST00000539320 CD248Q9HCU0 757 aa23.2■■□□□ 1.3
SCARB1-206ENST00000539320 SFMBT1Q9UHJ3 866 aa23.2■■□□□ 1.3
SCARB1-206ENST00000539320 RAD54BQ9Y620 910 aa23.2■■□□□ 1.3
SCARB1-206ENST00000539320 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.19■■□□□ 1.3
SCARB1-206ENST00000539320 LNP1A1A4G5 178 aa23.19■■□□□ 1.3
SCARB1-206ENST00000539320 CALCAP01258 141 aa23.19■■□□□ 1.3
SCARB1-206ENST00000539320 NDUFV2P19404 249 aa23.19■■□□□ 1.3
SCARB1-206ENST00000539320 KCNA4P22459 653 aa23.19■■□□□ 1.3
SCARB1-206ENST00000539320 GEN1Q17RS7 908 aa23.19■■□□□ 1.3
SCARB1-206ENST00000539320 MSANTD2Q6P1R3 559 aa23.19■■□□□ 1.3
SCARB1-206ENST00000539320 TMEFF1Q8IYR6 380 aa23.19■■□□□ 1.3
SCARB1-206ENST00000539320 IRGQQ8WZA9 623 aa23.19■■□□□ 1.3
SCARB1-206ENST00000539320 PIGKQ92643 395 aa23.19■■□□□ 1.3
SCARB1-206ENST00000539320 HSFY1Q96LI6 401 aa23.19■■□□□ 1.3
SCARB1-206ENST00000539320 KIAA1468Q9P260 1216 aa23.19■■□□□ 1.3
SCARB1-206ENST00000539320 ACACBO00763 2458 aa23.18■■□□□ 1.3
SCARB1-206ENST00000539320 TNRC6BQ9UPQ9 1833 aaKnown RBP23.18■■□□□ 1.3
SCARB1-206ENST00000539320 KHNYNO15037 678 aaKnown RBP23.18■■□□□ 1.3
SCARB1-206ENST00000539320 MSI1O43347 362 aaKnown RBP23.18■■□□□ 1.3
SCARB1-206ENST00000539320 LATS1O95835 1130 aa23.18■■□□□ 1.3
SCARB1-206ENST00000539320 ADRB1P08588 477 aa23.18■■□□□ 1.3
SCARB1-206ENST00000539320 PTGER3P43115 390 aa23.18■■□□□ 1.3
SCARB1-206ENST00000539320 ZNF445P59923 1031 aa23.18■■□□□ 1.3
SCARB1-206ENST00000539320 STARD3Q14849 445 aa23.18■■□□□ 1.3
SCARB1-206ENST00000539320 SPDYCQ5MJ68 293 aa23.18■■□□□ 1.3
SCARB1-206ENST00000539320 LYSMD4Q5XG99 296 aa23.18■■□□□ 1.3
SCARB1-206ENST00000539320 SLC36A4Q6YBV0 504 aa23.18■■□□□ 1.3
SCARB1-206ENST00000539320 DDI1Q8WTU0 396 aa23.18■■□□□ 1.3
SCARB1-206ENST00000539320 UCMAQ8WVF2 138 aa23.18■■□□□ 1.3
SCARB1-206ENST00000539320 ERLEC1Q96DZ1 483 aa23.18■■□□□ 1.3
SCARB1-206ENST00000539320 RWDD2AQ9UIY3 292 aa23.18■■□□□ 1.3
SCARB1-206ENST00000539320 PATE3B3GLJ2 98 aa23.17■■□□□ 1.3
SCARB1-206ENST00000539320 PIK3R2O00459 728 aa23.17■■□□□ 1.3
SCARB1-206ENST00000539320 TM4SF5O14894 197 aa23.17■■□□□ 1.3
SCARB1-206ENST00000539320 NPC1O15118 1278 aa23.17■■□□□ 1.3
SCARB1-206ENST00000539320 ZNF217O75362 1048 aa23.17■■□□□ 1.3
SCARB1-206ENST00000539320 GABBR2O75899 941 aa23.17■■□□□ 1.3
SCARB1-206ENST00000539320 FBXO21O94952 628 aa23.17■■□□□ 1.3
SCARB1-206ENST00000539320 KRT5P13647 590 aa23.17■■□□□ 1.3
SCARB1-206ENST00000539320 DPP6P42658 865 aa23.17■■□□□ 1.3
SCARB1-206ENST00000539320 EIF4HQ15056 248 aaKnown RBP23.17■■□□□ 1.3
SCARB1-206ENST00000539320 CAMK4Q16566 473 aa23.17■■□□□ 1.3
SCARB1-206ENST00000539320 MPPE1Q53F39 396 aa23.17■■□□□ 1.3
SCARB1-206ENST00000539320 GOLGA1Q92805 767 aa23.17■■□□□ 1.3
SCARB1-206ENST00000539320 PIWIL1Q96J94 861 aaKnown RBP23.17■■□□□ 1.3
SCARB1-206ENST00000539320 SLC2A11Q9BYW1 496 aa23.17■■□□□ 1.3
SCARB1-206ENST00000539320 EVLQ9UI08 416 aaPredicted RBP23.17■■□□□ 1.3
SCARB1-206ENST00000539320 CLEC4EQ9ULY5 219 aa23.17■■□□□ 1.3
SCARB1-206ENST00000539320 STON1Q9Y6Q2 735 aa23.17■■□□□ 1.3
SCARB1-206ENST00000539320 PI4KAP42356 2102 aa23.17■■□□□ 1.3
SCARB1-206ENST00000539320 IGHV1OR15-9A0A0B4J2B8 117 aa23.16■■□□□ 1.3
SCARB1-206ENST00000539320 AP5Z1O43299 807 aa23.16■■□□□ 1.3
SCARB1-206ENST00000539320 LTFP02788 710 aa23.16■■□□□ 1.3
SCARB1-206ENST00000539320 HOXD9P28356 352 aaPredicted RBP23.16■■□□□ 1.3
SCARB1-206ENST00000539320 RPL6Q02878 288 aaKnown RBP23.16■■□□□ 1.3
SCARB1-206ENST00000539320 SYT12Q8IV01 421 aa23.16■■□□□ 1.3
SCARB1-206ENST00000539320 CLEC4CQ8WTT0 213 aa23.16■■□□□ 1.3
SCARB1-206ENST00000539320 CHMP5Q9NZZ3 219 aa23.16■■□□□ 1.3
SCARB1-206ENST00000539320 THAP10Q9P2Z0 257 aaPredicted RBP23.16■■□□□ 1.3
SCARB1-206ENST00000539320 STOML2Q9UJZ1 356 aa23.16■■□□□ 1.3
SCARB1-206ENST00000539320 CYP8B1Q9UNU6 501 aa23.16■■□□□ 1.3
SCARB1-206ENST00000539320 CNTN6Q9UQ52 1028 aa23.16■■□□□ 1.3
SCARB1-206ENST00000539320 ATXN2Q99700 1313 aaKnown RBP23.15■■□□□ 1.3
SCARB1-206ENST00000539320 WASH3PC4AMC7 463 aa23.15■■□□□ 1.3
SCARB1-206ENST00000539320 TSPAN3O60637 253 aa23.15■■□□□ 1.3
SCARB1-206ENST00000539320 IL12RB1P42701 662 aa23.15■■□□□ 1.3
SCARB1-206ENST00000539320 E2F5Q15329 346 aa23.15■■□□□ 1.3
SCARB1-206ENST00000539320 KIAA1324Q6UXG2 1013 aaKnown RBP23.15■■□□□ 1.3
SCARB1-206ENST00000539320 MRGPRX1Q96LB2 322 aa23.15■■□□□ 1.3
SCARB1-206ENST00000539320 TMEM9BQ9NQ34 198 aa23.15■■□□□ 1.3
SCARB1-206ENST00000539320 ELOVL2Q9NXB9 296 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms