RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 SLX1AQ9BQ83 275 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PHF7Q9BWX1 381 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 DDX24Q9GZR7 859 aaKnown RBP eCLIP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PCDHAC1Q9H158 963 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PRDM13Q9H4Q3 707 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 GBA2Q9HCG7 927 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 DACT1Q9NYF0 836 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 STEAP1Q9UHE8 339 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 OGDHLQ9ULD0 1010 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 ZMYND8Q9ULU4 1186 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 SUFUQ9UMX1 484 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 SORCS3Q9UPU3 1222 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 CDYLQ9Y232 598 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 MAP3K2Q9Y2U5 619 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 TSC22D4Q9Y3Q8 395 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 CHST2Q9Y4C5 530 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PCDHAC2Q9Y5I4 1007 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PMF1-BGLAPU3KQ54 211 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 THOC2Q8NI27 1593 aaKnown RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 FAM90A18PA6NE21 464 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 FAM90A16PA6NEW6 464 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 FAM90A20PA6NIJ5 464 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 DRGXA6NNA5 263 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 FAM90A9PA6NNJ1 464 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 FAM90A5PA8MXJ8 464 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 AHRRA9YTQ3 701 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PRR5-ARHGAP8B1AHC4 643 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 FCHO1O14526 889 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 RPP40O75818 363 aaKnown RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 GAGE7O76087 117 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 SASH1O94885 1247 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 TPOP07202 933 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 FAM90A15PP0C7V4 464 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 FAM90A14PP0C7W9 464 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 GAGE12FP0CL80 117 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 GAGE12GP0CL81 117 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 GAGE12IP0CL82 117 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 ATP5JP18859 108 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 IL10P22301 178 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PSMA3P25788 255 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 APOBEC3AP31941 199 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 ELF1P32519 619 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PTDSS1P48651 473 aaKnown RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 AARSP49588 968 aaKnown RBP eCLIP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 NDUFV1P49821 464 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 GEMIN4P57678 1058 aaKnown RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PSMC6P62333 389 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 HSD11B2P80365 405 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 DEUP1Q05D60 604 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PTP4A2Q12974 167 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 GAGE1Q13065 139 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 GAGE4Q13068 117 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 CCNIQ14094 377 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 UBXN2BQ14CS0 331 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 MORF4L2Q15014 288 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 FAM110CQ1W6H9 321 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 GALNTL6Q49A17 601 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PPP6R3Q5H9R7 873 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 MSANTD2Q6P1R3 559 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 TAF2Q6P1X5 1199 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 MPZL3Q6UWV2 235 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 RSPH3Q86UC2 560 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 LRRTM4Q86VH4 590 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 KBTBD2Q8IY47 623 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PNPLA1Q8N8W4 532 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 SLC17A8Q8NDX2 589 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 TNIP2Q8NFZ5 429 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 CENPIQ92674 756 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 MUL1Q969V5 352 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 SPSB4Q96A44 273 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 KTI12Q96EK9 354 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 EEF2KMTQ96G04 330 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 SLC46A1Q96NT5 459 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 TWNKQ96RR1 684 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 ADAM2Q99965 735 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 CLSTN3Q9BQT9 956 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 GLIS2Q9BZE0 524 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 IMPG2Q9BZV3 1241 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 MTMR12Q9C0I1 747 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PDGFCQ9NRA1 345 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 RNF181Q9P0P0 153 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 ACAD8Q9UKU7 415 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 MAGED2Q9UNF1 606 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 MYRFQ9Y2G1 1151 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 MTF2Q9Y483 593 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 LYVE1Q9Y5Y7 322 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 FPGT-TNNI3KV9GXZ4 949 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 TMEM191CA6NGB0 347 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 STX16-NPEPL1H3BU86 382 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 J3KRW8 73 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 STX16O14662 325 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 CA12O43570 354 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 GPC4O75487 556 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 MBD4O95243 580 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 METTL18O95568 372 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 LDHCP07864 332 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 PTPN2P17706 415 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 ALOX12P18054 663 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 IL11P20809 199 aa1.18□□□□□ -2.22
HIF1A-204ENST00000539097 RRM1P23921 792 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms