RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ZC3H3Q8IXZ2 948 aaKnown RBP13.12□□□□□ -0.31
VAMP1-206ENST00000538970 ANKRD52Q8NB46 1076 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 CEP76Q8TAP6 659 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 TATDN2Q93075 761 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 CCDC34Q96HJ3 373 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 SCNM1Q9BWG6 230 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 DCLK3Q9C098 648 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 CAPN10Q9HC96 672 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 FSCN3Q9NQT6 498 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 RMND1Q9NWS8 449 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 MARCH2Q9P0N8 246 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 AGO1Q9UL18 857 aaKnown RBP13.12□□□□□ -0.31
VAMP1-206ENST00000538970 SLC6A14Q9UN76 642 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 STON1Q9Y6Q2 735 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 MYH10P35580 1976 aa13.12□□□□□ -0.31
VAMP1-206ENST00000538970 SMG1Q96Q15 3661 aaKnown RBP13.12□□□□□ -0.31
VAMP1-206ENST00000538970 PCDH15Q96QU1 1955 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 TMEM8BA6NDV4 472 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 WASH3PC4AMC7 463 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 ZBED1O96006 694 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 PRCPP42785 496 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 TKTL1P51854 596 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 SLC8A3P57103 927 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 CUL2Q13617 745 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 ENPP2Q13822 863 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 GOLGA7BQ2TAP0 167 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 COBLL1Q53SF7 1204 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 TCERG1LQ5VWI1 586 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 PM20D1Q6GTS8 502 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 RSRC2Q7L4I2 434 aaKnown RBP13.11□□□□□ -0.31
VAMP1-206ENST00000538970 BHLHA9Q7RTU4 235 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 RABEPKQ7Z6M1 372 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 FAM217AQ8IXS0 508 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 FMR1NBQ8N0W7 255 aaPredicted RBP13.11□□□□□ -0.31
VAMP1-206ENST00000538970 CPXM2Q8N436 756 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 TRIML1Q8N9V2 468 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 HSPA12BQ96MM6 686 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 THAP10Q9P2Z0 257 aaPredicted RBP13.11□□□□□ -0.31
VAMP1-206ENST00000538970 TSPAN16Q9UKR8 245 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 STRIP2Q9ULQ0 834 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 COQ4Q9Y3A0 265 aa13.11□□□□□ -0.31
VAMP1-206ENST00000538970 SLC12A8A0AV02 714 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 UPK3BL1B0FP48 263 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 UPK3BL2E5RIL1 263 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 TULP2O00295 520 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 XPO1O14980 1071 aaKnown RBP13.1□□□□□ -0.31
VAMP1-206ENST00000538970 NPC1O15118 1278 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 IL12RB1P42701 662 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 PMS1P54277 932 aaKnown RBP13.1□□□□□ -0.31
VAMP1-206ENST00000538970 BCAT1P54687 386 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 GFPT1Q06210 699 aaPredicted RBP13.1□□□□□ -0.31
VAMP1-206ENST00000538970 PDE4CQ08493 712 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 SEMA3BQ13214 749 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 STARD3Q14849 445 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 FUT11Q495W5 492 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 SOWAHCQ53LP3 525 aaPredicted RBP13.1□□□□□ -0.31
VAMP1-206ENST00000538970 ZNF658Q5TYW1 1059 aaPredicted RBP13.1□□□□□ -0.31
VAMP1-206ENST00000538970 KIAA1324Q6UXG2 1013 aaKnown RBP13.1□□□□□ -0.31
VAMP1-206ENST00000538970 ANKS1BQ7Z6G8 1248 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 PIP4P1Q86T03 277 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 METTL3Q86U44 580 aaKnown RBP13.1□□□□□ -0.31
VAMP1-206ENST00000538970 DENND1CQ8IV53 801 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 RBBP8NLQ8NC74 664 aaPredicted RBP13.1□□□□□ -0.31
VAMP1-206ENST00000538970 PLD4Q96BZ4 506 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 ZNF419Q96HQ0 510 aaPredicted RBP13.1□□□□□ -0.31
VAMP1-206ENST00000538970 PIWIL1Q96J94 861 aaKnown RBP13.1□□□□□ -0.31
VAMP1-206ENST00000538970 TSG101Q99816 390 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 GTPBP2Q9BX10 602 aaKnown RBP13.1□□□□□ -0.31
VAMP1-206ENST00000538970 ULBP1Q9BZM6 244 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 SLC32A1Q9H598 525 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 CLEC4EQ9ULY5 219 aa13.1□□□□□ -0.31
VAMP1-206ENST00000538970 LAMA5O15230 3695 aa13.09□□□□□ -0.31
VAMP1-206ENST00000538970 CYBBP04839 570 aa13.09□□□□□ -0.31
VAMP1-206ENST00000538970 ZNF132P52740 706 aa13.09□□□□□ -0.31
VAMP1-206ENST00000538970 ATXN3P54252 364 aaPredicted RBP13.09□□□□□ -0.31
VAMP1-206ENST00000538970 FKBP3Q00688 224 aaKnown RBP13.09□□□□□ -0.31
VAMP1-206ENST00000538970 ADIGQ0VDE8 80 aa13.09□□□□□ -0.31
VAMP1-206ENST00000538970 BST2Q10589 180 aaKnown RBP13.09□□□□□ -0.31
VAMP1-206ENST00000538970 EIF4HQ15056 248 aaKnown RBP13.09□□□□□ -0.31
VAMP1-206ENST00000538970 TRIP4Q15650 581 aaPredicted RBP13.09□□□□□ -0.31
VAMP1-206ENST00000538970 SGO2Q562F6 1265 aa13.09□□□□□ -0.31
VAMP1-206ENST00000538970 ANKRD40Q6AI12 368 aa13.09□□□□□ -0.31
VAMP1-206ENST00000538970 MINDY1Q8N5J2 469 aa13.09□□□□□ -0.31
VAMP1-206ENST00000538970 UBR7Q8N806 425 aa13.09□□□□□ -0.31
VAMP1-206ENST00000538970 SPATA20Q8TB22 786 aa13.09□□□□□ -0.31
VAMP1-206ENST00000538970 UCMAQ8WVF2 138 aa13.09□□□□□ -0.31
VAMP1-206ENST00000538970 NDRG1Q92597 394 aaKnown RBP13.09□□□□□ -0.31
VAMP1-206ENST00000538970 FOXJ1Q92949 421 aa13.09□□□□□ -0.31
VAMP1-206ENST00000538970 SLC35C1Q96A29 364 aa13.09□□□□□ -0.31
VAMP1-206ENST00000538970 GSDMAQ96QA5 445 aa13.09□□□□□ -0.31
VAMP1-206ENST00000538970 MKRN2Q9H000 416 aaKnown RBP13.09□□□□□ -0.31
VAMP1-206ENST00000538970 PRDM16Q9HAZ2 1276 aa13.09□□□□□ -0.31
VAMP1-206ENST00000538970 LRRC4Q9HBW1 653 aa13.09□□□□□ -0.31
VAMP1-206ENST00000538970 OLA1Q9NTK5 396 aaKnown RBP13.09□□□□□ -0.31
VAMP1-206ENST00000538970 USP36Q9P275 1121 aaKnown RBP13.09□□□□□ -0.31
VAMP1-206ENST00000538970 FREM2Q5SZK8 3169 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 MYO18AQ92614 2054 aaKnown RBP13.08□□□□□ -0.32
VAMP1-206ENST00000538970 TRIM49BA6NDI0 452 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 O00370 1275 aa13.08□□□□□ -0.32
VAMP1-206ENST00000538970 ARHGAP33O14559 1287 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms