RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 DTLQ9NZJ0 730 aa21.14■□□□□ 0.97
DDX55-205ENST00000538744 FBXW11Q9UKB1 542 aa21.14■□□□□ 0.97
DDX55-205ENST00000538744 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.14■□□□□ 0.97
DDX55-205ENST00000538744 HACD1B0YJ81 288 aa21.13■□□□□ 0.97
DDX55-205ENST00000538744 SYN3O14994 580 aa21.13■□□□□ 0.97
DDX55-205ENST00000538744 CHADO15335 359 aa21.13■□□□□ 0.97
DDX55-205ENST00000538744 TADA2AO75478 443 aa21.13■□□□□ 0.97
DDX55-205ENST00000538744 TMEM63AO94886 807 aa21.13■□□□□ 0.97
DDX55-205ENST00000538744 KCNJ11Q14654 390 aa21.13■□□□□ 0.97
DDX55-205ENST00000538744 ARL13BQ3SXY8 428 aa21.13■□□□□ 0.97
DDX55-205ENST00000538744 BSPRYQ5W0U4 402 aa21.13■□□□□ 0.97
DDX55-205ENST00000538744 PPP1R21Q6ZMI0 780 aa21.13■□□□□ 0.97
DDX55-205ENST00000538744 EDEM1Q92611 657 aa21.13■□□□□ 0.97
DDX55-205ENST00000538744 ETNK2Q9NVF9 386 aa21.13■□□□□ 0.97
DDX55-205ENST00000538744 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.13■□□□□ 0.97
DDX55-205ENST00000538744 LRFN2Q9ULH4 789 aa21.13■□□□□ 0.97
DDX55-205ENST00000538744 SF3B1O75533 1304 aaKnown RBP eCLIP21.13■□□□□ 0.973e-6■■■■■ 88.4
DDX55-205ENST00000538744 MYO16Q9Y6X6 1858 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 TCRBV7S3A2A0A539 114 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 E7ESA3 106 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 EEF2KO00418 725 aaKnown RBP21.12■□□□□ 0.97
DDX55-205ENST00000538744 CREB3O43889 395 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 GRIK1P39086 918 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 GAD2Q05329 585 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 SLC39A12Q504Y0 691 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 KCNT2Q6UVM3 1135 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 BEND5Q7L4P6 421 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 TAOK1Q7L7X3 1001 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 PDIK1LQ8N165 341 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 ZNF784Q8NCA9 323 aaPredicted RBP21.12■□□□□ 0.97
DDX55-205ENST00000538744 OLFM3Q96PB7 478 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 RAB6BQ9NRW1 208 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 DGKIO75912 1065 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 LSP1P33241 339 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 HP1BP3Q5SSJ5 553 aaPredicted RBP21.12■□□□□ 0.97
DDX55-205ENST00000538744 FNBP1LQ5T0N5 605 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 CCDC13Q8IYE1 715 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 TFB1MQ8WVM0 346 aaKnown RBP21.12■□□□□ 0.97
DDX55-205ENST00000538744 CASD1Q96PB1 797 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 COLEC11Q9BWP8 271 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 KLC2Q9H0B6 622 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 VPS37BQ9H9H4 285 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 LGALS13Q9UHV8 139 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 OGDHLQ9ULD0 1010 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 MFHAS1Q9Y4C4 1052 aa21.12■□□□□ 0.97
DDX55-205ENST00000538744 VWA8A3KMH1 1905 aa21.11■□□□□ 0.97
DDX55-205ENST00000538744 HOXA2O43364 376 aa21.11■□□□□ 0.97
DDX55-205ENST00000538744 PQBP1O60828 265 aaKnown RBP21.11■□□□□ 0.97
DDX55-205ENST00000538744 CDH16O75309 829 aa21.11■□□□□ 0.97
DDX55-205ENST00000538744 GCATO75600 419 aa21.11■□□□□ 0.97
DDX55-205ENST00000538744 MYCP01106 439 aaPredicted RBP21.11■□□□□ 0.97
DDX55-205ENST00000538744 OR4Q2P0C623 313 aa21.11■□□□□ 0.97
DDX55-205ENST00000538744 MMP13P45452 471 aa21.11■□□□□ 0.97
DDX55-205ENST00000538744 CXCR3P49682 368 aa21.11■□□□□ 0.97
DDX55-205ENST00000538744 DPYSQ14117 519 aa21.11■□□□□ 0.97
DDX55-205ENST00000538744 MTFR1Q15390 333 aa21.11■□□□□ 0.97
DDX55-205ENST00000538744 NFE2Q16621 373 aaPredicted RBP21.11■□□□□ 0.97
DDX55-205ENST00000538744 ZSCAN26Q16670 478 aa21.11■□□□□ 0.97
DDX55-205ENST00000538744 HEATR6Q6AI08 1181 aaKnown RBP21.11■□□□□ 0.97
DDX55-205ENST00000538744 RFX8Q6ZV50 586 aa21.11■□□□□ 0.97
DDX55-205ENST00000538744 ANKMY2Q8IV38 441 aa21.11■□□□□ 0.97
DDX55-205ENST00000538744 RIBC1Q8N443 379 aaPredicted RBP21.11■□□□□ 0.97
DDX55-205ENST00000538744 PYROXD1Q8WU10 500 aa21.11■□□□□ 0.97
DDX55-205ENST00000538744 FRMD8Q9BZ67 464 aaPredicted RBP21.11■□□□□ 0.97
DDX55-205ENST00000538744 ADAM28Q9UKQ2 775 aa21.11■□□□□ 0.97
DDX55-205ENST00000538744 SCN5AQ14524 2016 aa21.1■□□□□ 0.97
DDX55-205ENST00000538744 EXOC1LA0A1B0GW35 172 aa21.1■□□□□ 0.97
DDX55-205ENST00000538744 SRRM3A6NNA2 597 aaPredicted RBP21.1■□□□□ 0.97
DDX55-205ENST00000538744 E7EVH7 732 aa21.1■□□□□ 0.97
DDX55-205ENST00000538744 MFSD11O43934 449 aa21.1■□□□□ 0.97
DDX55-205ENST00000538744 HCAR3P49019 387 aa21.1■□□□□ 0.97
DDX55-205ENST00000538744 ZNF135P52742 658 aaPredicted RBP21.1■□□□□ 0.97
DDX55-205ENST00000538744 SLC5A3P53794 718 aa21.1■□□□□ 0.97
DDX55-205ENST00000538744 SEMA3BQ13214 749 aa21.1■□□□□ 0.97
DDX55-205ENST00000538744 PAFAH1B3Q15102 231 aaKnown RBP21.1■□□□□ 0.97
DDX55-205ENST00000538744 MSS51Q4VC12 460 aa21.1■□□□□ 0.97
DDX55-205ENST00000538744 VARS2Q5ST30 1063 aaKnown RBP21.1■□□□□ 0.97
DDX55-205ENST00000538744 ATP11CQ8NB49 1132 aa21.1■□□□□ 0.97
DDX55-205ENST00000538744 SCAMP5Q8TAC9 235 aa21.1■□□□□ 0.97
DDX55-205ENST00000538744 FUBP3Q96I24 572 aaKnown RBP eCLIP21.1■□□□□ 0.97
DDX55-205ENST00000538744 C5orf60A6NFR6 353 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 TNFRSF10BO14763 440 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 BANF1O75531 89 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 CCL5P13501 91 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 PHBP35232 272 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 MAGEA6P43360 314 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 BBS9Q3SYG4 887 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 TAC4Q86UU9 113 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 CCDC110Q8TBZ0 833 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 DQX1Q8TE96 717 aaKnown RBP21.09■□□□□ 0.97
DDX55-205ENST00000538744 SELENOSQ9BQE4 189 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 RNF208Q9H0X6 261 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 WDCPQ9H6R7 721 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 PPCSQ9HAB8 311 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 ANLNQ9NQW6 1124 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 ABCC13Q9NSE7 274 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 ABI2Q9NYB9 513 aaPredicted RBP21.09■□□□□ 0.97
DDX55-205ENST00000538744 ZMYND8Q9ULU4 1186 aaPredicted RBP21.09■□□□□ 0.97
DDX55-205ENST00000538744 TTC3P53804 2025 aa21.09■□□□□ 0.97
DDX55-205ENST00000538744 TSHRP16473 764 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms