RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 PRR23BQ6ZRT6 265 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 KIAA0408Q6ZU52 694 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 C16orf86Q6ZW13 317 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 SYTL1Q8IYJ3 562 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 DEPDC4Q8N2C3 294 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 GRPEL2Q8TAA5 225 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 ACMSDQ8TDX5 336 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 NUAK2Q9H093 628 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 MUC13Q9H3R2 512 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 RAVER2Q9HCJ3 691 aaKnown RBP7.1□□□□□ -1.27
SORT1-209ENST00000538502 ATP6V1HQ9UI12 483 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 H3BMM5 538 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 MATN2O00339 956 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 TRIM38O00635 465 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 FBXO21O94952 628 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 CRTAMO95727 393 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 CD44P16070 742 aaKnown RBP7.1□□□□□ -1.27
SORT1-209ENST00000538502 ARHGEF7Q14155 803 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 TYSND1Q2T9J0 566 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 IER5Q5VY09 327 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 LPAR1Q92633 364 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 TMEM237Q96Q45 408 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 TBCBQ99426 244 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 MTMR4Q9NYA4 1195 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 PCYOX1Q9UHG3 505 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 ASAP1Q9ULH1 1129 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 TBX20Q9UMR3 447 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 USP32Q8NFA0 1604 aa7.1□□□□□ -1.27
SORT1-209ENST00000538502 SEC24AO95486 1093 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 ECDO95905 644 aaPredicted RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 MOCS2O96007 188 aaPredicted RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 SERPINA6P08185 405 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 ETS1P14921 441 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 UQCRBP14927 111 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 ALOX15P16050 662 aaPredicted RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 ZNF12P17014 697 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 CHRM3P20309 590 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 RPL21P46778 160 aaKnown RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 PIK3CGP48736 1102 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 ACLYP53396 1101 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 TCHHL1Q5QJ38 904 aaPredicted RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 N4BP2L1Q5TBK1 243 aaPredicted RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 RBM44Q6ZP01 1051 aaKnown RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 DENND5BQ6ZUT9 1274 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 PROSER1Q86XN7 944 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 CACTIN-AS1Q8N1I8 211 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 RP9Q8TA86 221 aaKnown RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 GANCQ8TET4 914 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 CENPIQ92674 756 aaPredicted RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 SEMA4AQ9H3S1 761 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 ARHGAP20Q9P2F6 1191 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 CORO2BQ9UQ03 480 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 UMODL1Q5DID0 1318 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 TNS3Q68CZ2 1445 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 LMTK3Q96Q04 1460 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 TSPAN19P0C672 248 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 PRKAR1AP10644 381 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 NEK3P51956 506 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 ANTXR2P58335 489 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 RPL26P61254 145 aaKnown RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 PDK4Q16654 411 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 ATG9AQ7Z3C6 839 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 CREG2Q8IUH2 290 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 TTC30BQ8N4P2 665 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 LRRC17Q8N6Y2 441 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 BHLHE22Q8NFJ8 381 aaPredicted RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 ITFG1Q8TB96 612 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 SRPK1Q96SB4 655 aaKnown RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 ATMINO43313 823 aaPredicted RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 SMNDC1O75940 238 aaKnown RBP eCLIP7.09□□□□□ -1.27
SORT1-209ENST00000538502 HSMCR30P0CW71 290 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 ALDH6A1Q02252 535 aaKnown RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 DGKDQ16760 1214 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 DCP1BQ8IZD4 617 aaKnown RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 CDK20Q8IZL9 346 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 MOSPD2Q8NHP6 518 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 SPATA33Q96N06 139 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 CYP3A43Q9HB55 503 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 TRHDEQ9UKU6 1024 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 CDH9Q9ULB4 789 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 WBP11Q9Y2W2 641 aaKnown RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 ZC3H4Q9UPT8 1303 aaKnown RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 UBE2QL1A1L167 161 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 SGPL1O95470 568 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 ZNF682O95780 498 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 CASP4P49662 377 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 PSMD4P55036 377 aaKnown RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 GRIK3Q13003 919 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 FAM98CQ17RN3 349 aaKnown RBP7.09□□□□□ -1.27
SORT1-209ENST00000538502 RIPOR1Q6ZS17 1223 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 EPHX4Q8IUS5 362 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 GIPC3Q8TF64 312 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 MASTLQ96GX5 879 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 MXRA8Q9BRK3 442 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 KCTD10Q9H3F6 313 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 POLD4Q9HCU8 107 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 HPS4Q9NQG7 708 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 EHD3Q9NZN3 535 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 SPASTQ9UBP0 616 aa7.09□□□□□ -1.27
SORT1-209ENST00000538502 MTF2Q9Y483 593 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms