RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 ERVK-21P61565 698 aa20.24■□□□□ 0.83
EFCAB11-202ENST00000538485 ANKRD20A8PQ5CZ79 823 aa20.24■□□□□ 0.83
EFCAB11-202ENST00000538485 EFHC2Q5JST6 749 aa20.24■□□□□ 0.83
EFCAB11-202ENST00000538485 CCDC70Q6NSX1 233 aa20.24■□□□□ 0.83
EFCAB11-202ENST00000538485 BBS12Q6ZW61 710 aa20.24■□□□□ 0.83
EFCAB11-202ENST00000538485 DNAJB7Q7Z6W7 309 aaPredicted RBP20.24■□□□□ 0.83
EFCAB11-202ENST00000538485 RFX6Q8HWS3 928 aa20.24■□□□□ 0.83
EFCAB11-202ENST00000538485 PSMG2Q969U7 264 aa20.24■□□□□ 0.83
EFCAB11-202ENST00000538485 TRMT2BQ96GJ1 504 aaKnown RBP20.24■□□□□ 0.83
EFCAB11-202ENST00000538485 ZNF512Q96ME7 567 aaPredicted RBP20.24■□□□□ 0.83
EFCAB11-202ENST00000538485 SERPINB11Q96P15 392 aa20.24■□□□□ 0.83
EFCAB11-202ENST00000538485 DCLK3Q9C098 648 aa20.24■□□□□ 0.83
EFCAB11-202ENST00000538485 CCSER2Q9H7U1 834 aa20.24■□□□□ 0.83
EFCAB11-202ENST00000538485 ZMYND10O75800 440 aa20.23■□□□□ 0.83
EFCAB11-202ENST00000538485 COILP38432 576 aaPredicted RBP20.23■□□□□ 0.83
EFCAB11-202ENST00000538485 EPHB3P54753 998 aa20.23■□□□□ 0.83
EFCAB11-202ENST00000538485 EFEMP1Q12805 493 aa20.23■□□□□ 0.83
EFCAB11-202ENST00000538485 SNX1Q13596 522 aa20.23■□□□□ 0.83
EFCAB11-202ENST00000538485 TAF12Q16514 161 aa20.23■□□□□ 0.83
EFCAB11-202ENST00000538485 ARL13BQ3SXY8 428 aa20.23■□□□□ 0.83
EFCAB11-202ENST00000538485 PCDH19Q8TAB3 1148 aa20.23■□□□□ 0.83
EFCAB11-202ENST00000538485 RNF34Q969K3 372 aa20.23■□□□□ 0.83
EFCAB11-202ENST00000538485 HAUS1Q96CS2 278 aa20.23■□□□□ 0.83
EFCAB11-202ENST00000538485 FAF2Q96CS3 445 aa20.23■□□□□ 0.83
EFCAB11-202ENST00000538485 SAMD11Q96NU1 681 aa20.23■□□□□ 0.83
EFCAB11-202ENST00000538485 MAK16Q9BXY0 300 aaKnown RBP20.23■□□□□ 0.83
EFCAB11-202ENST00000538485 CERS4Q9HA82 394 aa20.23■□□□□ 0.83
EFCAB11-202ENST00000538485 CWC15Q9P013 229 aaKnown RBP20.23■□□□□ 0.83
EFCAB11-202ENST00000538485 PCYOX1Q9UHG3 505 aa20.23■□□□□ 0.83
EFCAB11-202ENST00000538485 TARSL2A2RTX5 802 aaKnown RBP20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 ZNF840PA6NDX5 716 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 H0YGN5 161 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 TTI1O43156 1089 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 TLR5O60602 858 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 GLUD1P00367 558 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 GOT1P17174 413 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 CLCN4P51793 760 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 PLD1Q13393 1074 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 CCNG2Q16589 344 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 SNX30Q5VWJ9 437 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 PQLC3Q8N755 202 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 KREMEN2Q8NCW0 462 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 PDZD8Q8NEN9 1154 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 CCDC26Q8TAB7 109 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 OVCA2Q8WZ82 227 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 CSPG4P5Q96PW8 444 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 ARHGEF38Q9NXL2 777 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 ZSCAN5CA6NGD5 496 aaPredicted RBP20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 ZNF487B1APH4 448 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 FAM72CH0Y354 149 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 H3BNC9 293 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 C8AP07357 584 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 CCR1P32246 355 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 FNTAP49354 379 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 DR1Q01658 176 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 C10orf120Q5SQS8 335 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 FAM72AQ5TYM5 149 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 FAM72DQ6L9T8 149 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 MAATS1Q7Z4T9 603 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 FAM72BQ86X60 149 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 HOMER3Q9NSC5 361 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 OLA1Q9NTK5 396 aaKnown RBP20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 STIM2Q9P246 746 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 TLR6Q9Y2C9 796 aa20.22■□□□□ 0.83
EFCAB11-202ENST00000538485 GPM6BQ13491 265 aa20.21■□□□□ 0.83
EFCAB11-202ENST00000538485 TFDP2Q14188 446 aa20.21■□□□□ 0.83
EFCAB11-202ENST00000538485 BRMS1LQ5PSV4 323 aa20.21■□□□□ 0.83
EFCAB11-202ENST00000538485 MIB1Q86YT6 1006 aa20.21■□□□□ 0.83
EFCAB11-202ENST00000538485 CCDC105Q8IYK2 499 aa20.21■□□□□ 0.83
EFCAB11-202ENST00000538485 PLD5Q8N7P1 536 aa20.21■□□□□ 0.83
EFCAB11-202ENST00000538485 SLC39A13Q96H72 371 aa20.21■□□□□ 0.83
EFCAB11-202ENST00000538485 MARCH2Q9P0N8 246 aa20.21■□□□□ 0.83
EFCAB11-202ENST00000538485 MTCL1Q9Y4B5 1905 aaKnown RBP20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 APOC4-APOC2K7ER74 178 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 CREB3O43889 395 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 HEXIM1O94992 359 aaKnown RBP20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 APOC2P02655 101 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 PECAM1P16284 738 aaPredicted RBP20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 ARL4AP40617 200 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 VSNL1P62760 191 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 SEMA3BQ13214 749 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 PPP2R5DQ14738 602 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 SLC9A4Q6AI14 798 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 CCDC149Q6ZUS6 474 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 TMEM150AQ86TG1 271 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 ACTL9Q8TC94 416 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 TRPM5Q9NZQ8 1165 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 RCOR3Q9P2K3 495 aaPredicted RBP20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 DNPEPQ9ULA0 475 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 KCNU1A8MYU2 1149 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 LIASO43766 372 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 LPXNO60711 386 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 GGCXP38435 758 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 PTGIRP43119 386 aa20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 OTUD4Q01804 1114 aaKnown RBP20.2■□□□□ 0.82
EFCAB11-202ENST00000538485 DHX34Q14147 1143 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms