RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 CDH17Q12864 832 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 ZNF544Q6NX49 715 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 TFAP2DQ7Z6R9 452 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 PPP1R10Q96QC0 940 aaKnown RBP17.26■□□□□ 0.35
SCARB1-205ENST00000538291 FBXL21Q9UKT6 434 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 LZTS1Q9Y250 596 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 REREQ9P2R6 1566 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 ABCA6Q8N139 1617 aa17.26■□□□□ 0.35
SCARB1-205ENST00000538291 TMEM114B3SHH9 223 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 XPO1O14980 1071 aaKnown RBP17.25■□□□□ 0.35
SCARB1-205ENST00000538291 MAPK9P45984 424 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 TUBP50607 506 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 HIRAP54198 1017 aaPredicted RBP17.25■□□□□ 0.35
SCARB1-205ENST00000538291 PPATQ06203 517 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 MMRN1Q13201 1228 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 SEC23AQ15436 765 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 NIPA1Q7RTP0 329 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 MIER2Q8N344 545 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 RNF208Q9H0X6 261 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 TBC1D23Q9NUY8 699 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 GPRC5DQ9NZD1 345 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 TRPC4Q9UBN4 977 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 HEY2Q9UBP5 337 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 ERI2A8K979 691 aaKnown RBP17.25■□□□□ 0.35
SCARB1-205ENST00000538291 ACKR2O00590 384 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 GSTM1P09488 218 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 CD44P16070 742 aaKnown RBP17.25■□□□□ 0.35
SCARB1-205ENST00000538291 GTF2E2P29084 291 aaKnown RBP17.25■□□□□ 0.35
SCARB1-205ENST00000538291 PPIL2Q13356 520 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 ZNF268Q14587 947 aaPredicted RBP17.25■□□□□ 0.35
SCARB1-205ENST00000538291 SYTL1Q8IYJ3 562 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 PGLYRP2Q96PD5 576 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 ACOX2Q99424 681 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 BBS2Q9BXC9 721 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 POLG2Q9UHN1 485 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 NFASCO94856 1347 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 CPA3P15088 417 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 NME5P56597 212 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 ACVR2BQ13705 512 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 ZPBP2Q6X784 338 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 RIN3Q8TB24 985 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 PRKD2Q9BZL6 878 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 SALL1Q9NSC2 1324 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 hCG_2014768A0A024R1R8 64 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 CYP2A6P11509 494 aaPredicted RBP17.25■□□□□ 0.35
SCARB1-205ENST00000538291 SHMT1P34896 483 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 PEX5P50542 639 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 SLC30A10Q6XR72 485 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 MDM1Q8TC05 714 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 EPS8L3Q8TE67 593 aaKnown RBP17.25■□□□□ 0.35
SCARB1-205ENST00000538291 SERAC1Q96JX3 654 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 DCLK3Q9C098 648 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 TMEM51Q9NW97 253 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 CD151P48509 253 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 SEC24CP53992 1094 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 RGS18Q9NS28 235 aa17.25■□□□□ 0.35
SCARB1-205ENST00000538291 IGF2BP3O00425 579 aaKnown RBP eCLIP17.24■□□□□ 0.353e-8■■■□□ 18.8
SCARB1-205ENST00000538291 RARRES1P49788 294 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 ERVK-24P63145 666 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 NR6A1Q15406 480 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 IQSEC1Q6DN90 963 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 ZCCHC8Q6NZY4 707 aaKnown RBP17.24■□□□□ 0.35
SCARB1-205ENST00000538291 ACTL9Q8TC94 416 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 PACSIN1Q9BY11 444 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 ZNF711Q9Y462 761 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 UMODL1Q5DID0 1318 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 POU6F1Q14863 301 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 ZNF557Q8N988 423 aaPredicted RBP17.24■□□□□ 0.35
SCARB1-205ENST00000538291 APBB2Q92870 758 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 PARVBQ9HBI1 364 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 WNT10BO00744 389 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 CCNT2O60583 730 aaKnown RBP17.24■□□□□ 0.35
SCARB1-205ENST00000538291 RPN2P04844 631 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 PYGMP11217 842 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 BNC2Q6ZN30 1099 aaPredicted RBP17.24■□□□□ 0.35
SCARB1-205ENST00000538291 C1QTNF7Q9BXJ2 289 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 DNAJC16Q9Y2G8 782 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 NR2E3Q9Y5X4 410 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 NR5A2O00482 541 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 ZNF682O95780 498 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 FYNP06241 537 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 POU1F1P28069 291 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 HLA-DQA1Q5Y7H0 255 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 ACTRT1Q8TDG2 376 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 MED8Q96G25 268 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 MAGEB18Q96M61 343 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 SLC24A2Q9UI40 661 aa17.24■□□□□ 0.35
SCARB1-205ENST00000538291 ADM5C9JUS6 153 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 OR56A5P0C7T3 313 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 PRLRP16471 622 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 ACOX1Q15067 660 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 LGI2Q8N0V4 545 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 ZNF606Q8WXB4 792 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 FAM120BQ96EK7 910 aaKnown RBP17.23■□□□□ 0.35
SCARB1-205ENST00000538291 CDCA5Q96FF9 252 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 CAAP1Q9H8G2 361 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 SPG21Q9NZD8 308 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 SPTLC1O15269 473 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 RAD51BO15315 384 aa17.23■□□□□ 0.35
SCARB1-205ENST00000538291 CYP7B1O75881 506 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms