RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 ETNK2Q9NVF9 386 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 MKS1Q9NXB0 559 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 RCOR3Q9P2K3 495 aaPredicted RBP9.59□□□□□ -0.87
DDB1-211ENST00000538280 ZNF180Q9UJW8 692 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 CHMP2BQ9UQN3 213 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 Q9Y3F1 56 aa9.59□□□□□ -0.87
DDB1-211ENST00000538280 SF3B1O75533 1304 aaKnown RBP eCLIP9.58□□□□□ -0.88
DDB1-211ENST00000538280 IQANK1A0A1B0GTG1 560 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 TCRBV9S1A1TA0A576 114 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 A8MXQ7 604 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 KPNA7A9QM74 516 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 TRDMT1O14717 391 aaKnown RBP9.58□□□□□ -0.88
DDB1-211ENST00000538280 XPO1O14980 1071 aaKnown RBP9.58□□□□□ -0.88
DDB1-211ENST00000538280 KCNN4O15554 427 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 DYNC1LI2O43237 492 aaPredicted RBP9.58□□□□□ -0.88
DDB1-211ENST00000538280 HCRTO43612 131 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 DGKIO75912 1065 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 ZBED1O96006 694 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 CCDC130P13994 396 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 CCNB1P14635 433 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 NQO1P15559 274 aaKnown RBP9.58□□□□□ -0.88
DDB1-211ENST00000538280 TFE3P19532 575 aaPredicted RBP9.58□□□□□ -0.88
DDB1-211ENST00000538280 CA4P22748 312 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 ETV4P43268 484 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 TAF6P49848 677 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 ATP11AP98196 1134 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 SOX4Q06945 474 aaPredicted RBP9.58□□□□□ -0.88
DDB1-211ENST00000538280 ADCY1Q08828 1119 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 TMEM62Q0P6H9 643 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 SEMA5AQ13591 1074 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 SV2CQ496J9 727 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 SLC45A4Q5BKX6 768 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 EFHC1Q5JVL4 640 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 GLRA4Q5JXX5 417 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 OTUD1Q5VV17 481 aaPredicted RBP9.58□□□□□ -0.88
DDB1-211ENST00000538280 ICE2Q659A1 982 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 SCYL2Q6P3W7 929 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 LVRNQ6Q4G3 990 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 ASRGL1Q7L266 308 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 FAM228AQ86W67 206 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 SCUBE3Q8IX30 993 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 PARP9Q8IXQ6 854 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 SMG8Q8ND04 991 aaKnown RBP9.58□□□□□ -0.88
DDB1-211ENST00000538280 CLEC4CQ8WTT0 213 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 C10orf82Q8WW14 230 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 TMEM40Q8WWA1 233 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 APBB2Q92870 758 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 OLFM3Q96PB7 478 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 KCTD15Q96SI1 283 aaPredicted RBP9.58□□□□□ -0.88
DDB1-211ENST00000538280 HNRNPABQ99729 332 aaKnown RBP9.58□□□□□ -0.88
DDB1-211ENST00000538280 LPIN3Q9BQK8 851 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 B3GNT5Q9BYG0 378 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 DNAI2Q9GZS0 605 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 VPS11Q9H270 941 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 PRDM6Q9NQX0 595 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 KLHL14Q9P2G3 628 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 RAPGEFL1Q9UHV5 662 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 PHTF1Q9UMS5 762 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 AP4E1Q9UPM8 1137 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 HES2Q9Y543 173 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 USH1CQ9Y6N9 552 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 CHD9Q3L8U1 2897 aa9.58□□□□□ -0.88
DDB1-211ENST00000538280 HACD1B0YJ81 288 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 CHUKO15111 745 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 ATP2C2O75185 946 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 KRT4P19013 534 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 AKAP5P24588 427 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 TKTP29401 623 aaKnown RBP9.57□□□□□ -0.88
DDB1-211ENST00000538280 GNL1P36915 607 aaPredicted RBP9.57□□□□□ -0.88
DDB1-211ENST00000538280 MATKP42679 507 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 CRYBB1P53674 252 aaPredicted RBP9.57□□□□□ -0.88
DDB1-211ENST00000538280 ZNF200P98182 395 aaPredicted RBP9.57□□□□□ -0.88
DDB1-211ENST00000538280 SLC10A2Q12908 348 aaPredicted RBP9.57□□□□□ -0.88
DDB1-211ENST00000538280 DNAJC3Q13217 504 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 PTK7Q13308 1070 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 KBTBD12Q3ZCT8 623 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 FAM133BQ5BKY9 247 aaKnown RBP9.57□□□□□ -0.88
DDB1-211ENST00000538280 HHATQ5VTY9 493 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 STEAP4Q687X5 459 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 OLFML2BQ68BL8 750 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 NCBP2-AS2Q69YL0 99 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 CYS1Q717R9 158 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 OTOAQ7RTW8 1153 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 TLK2Q86UE8 772 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 NME8Q8N427 588 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 LRRC8CQ8TDW0 803 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 DNAJB3Q8WWF6 145 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 KCTD13Q8WZ19 329 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 SPOCK2Q92563 424 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 ZNF75CPQ92670 426 aaPredicted RBP9.57□□□□□ -0.88
DDB1-211ENST00000538280 NT5C3BQ969T7 300 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 APOPT1Q96IL0 206 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 SIGLEC10Q96LC7 697 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 CSPG4P5Q96PW8 444 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 NPY6RQ99463 290 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 KLC2Q9H0B6 622 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 ECT2Q9H8V3 914 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 ETNK1Q9HBU6 452 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 ARHGEF3Q9NR81 526 aa9.57□□□□□ -0.88
DDB1-211ENST00000538280 RAB6BQ9NRW1 208 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms