RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 VAV3Q9UKW4 847 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 SLC4A7Q9Y6M7 1214 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 MYH2Q9UKX2 1941 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 TTLL13PA6NNM8 815 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 B4GALT5O43286 388 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 PFDN1O60925 122 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 ZSCAN5DPP0CG00 497 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 CYTH1Q15438 398 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 CNGA2Q16280 664 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 ATP13A4Q4VNC1 1196 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 ZDHHC17Q8IUH5 632 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 UNC45BQ8IWX7 931 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 CARNMT1Q8N4J0 409 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.36□□□□□ -0.75
GGA3-201ENST00000537686 MTMR14Q8NCE2 650 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 LNX1Q8TBB1 728 aaPredicted RBP10.36□□□□□ -0.75
GGA3-201ENST00000537686 HTR3CQ8WXA8 447 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 USP13Q92995 863 aaPredicted RBP10.36□□□□□ -0.75
GGA3-201ENST00000537686 EME1Q96AY2 570 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 TUBGCP3Q96CW5 907 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 YIPF3Q9GZM5 350 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 BRD8Q9H0E9 1235 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 RRN3Q9NYV6 651 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 VANGL2Q9ULK5 521 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 TRPV2Q9Y5S1 764 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 SPTLC1O15269 473 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 AKAP10O43572 662 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 RAMP2O60895 175 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 USP12O75317 370 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 YBX3P16989 372 aaKnown RBP eCLIP10.36□□□□□ -0.754e-6■□□□□ 8.3
GGA3-201ENST00000537686 WEE1P30291 646 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 MARCKSL1P49006 195 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 LRRC74AQ0VAA2 488 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 INPP5AQ14642 412 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 WSCD1Q658N2 575 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 WNK4Q96J92 1243 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 CIPCQ9C0C6 399 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 ZCWPW1Q9H0M4 648 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 FBXO44Q9H4M3 255 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 RIC8BQ9NVN3 520 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 UTP6Q9NYH9 597 aaKnown RBP10.36□□□□□ -0.75
GGA3-201ENST00000537686 KIF17Q9P2E2 1029 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 THSD7AQ9UPZ6 1657 aa10.36□□□□□ -0.75
GGA3-201ENST00000537686 RNF103O00237 685 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 CES2O00748 559 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 TSPAN3O60637 253 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 VPS26AO75436 327 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 SERPINF2P08697 491 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 RBL1P28749 1068 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 SERPINB8P50452 374 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 TUBP50607 506 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 TBX4P57082 545 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 RHOAP61586 193 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 SETD3Q86TU7 594 aaPredicted RBP10.35□□□□□ -0.75
GGA3-201ENST00000537686 SUGP1Q8IWZ8 645 aaKnown RBP10.35□□□□□ -0.75
GGA3-201ENST00000537686 SNX31Q8N9S9 440 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 UBE2OQ9C0C9 1292 aaKnown RBP10.35□□□□□ -0.75
GGA3-201ENST00000537686 HMX1Q9NP08 348 aaPredicted RBP10.35□□□□□ -0.75
GGA3-201ENST00000537686 MRGBPQ9NV56 204 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 STX18Q9P2W9 335 aaKnown RBP10.35□□□□□ -0.75
GGA3-201ENST00000537686 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.35□□□□□ -0.75
GGA3-201ENST00000537686 GON4LQ3T8J9 2241 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 APOC4-APOC2K7ER74 178 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 CLASP2O75122 1294 aaKnown RBP10.35□□□□□ -0.75
GGA3-201ENST00000537686 CCNE2O96020 404 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 APOC2P02655 101 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 USP17L7P0C7H9 530 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 MLH1P40692 756 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 IFI35P80217 286 aaPredicted RBP10.35□□□□□ -0.75
GGA3-201ENST00000537686 FMO1Q01740 532 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 ZNF844Q08AG5 666 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 TSEN2Q8NCE0 465 aaKnown RBP10.35□□□□□ -0.75
GGA3-201ENST00000537686 CEP70Q8NHQ1 597 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 SHISA4Q96DD7 197 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 UBXN6Q9BZV1 441 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 ELOVL4Q9GZR5 314 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 TLR8Q9NR97 1041 aaKnown RBP10.35□□□□□ -0.75
GGA3-201ENST00000537686 FAM53CQ9NYF3 392 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 WWOXQ9NZC7 414 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 DCDC2Q9UHG0 476 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 RUVBL2Q9Y230 463 aaKnown RBP10.35□□□□□ -0.75
GGA3-201ENST00000537686 PLIN4Q96Q06 1357 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 UMODL1Q5DID0 1318 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 ZSCAN9O15535 394 aaPredicted RBP10.35□□□□□ -0.75
GGA3-201ENST00000537686 TPST1O60507 370 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 SASH3O75995 380 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 SEC24DO94855 1032 aaPredicted RBP10.35□□□□□ -0.75
GGA3-201ENST00000537686 MT-CO1P00395 513 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 CPA3P15088 417 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 RENBPP51606 427 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 COPAP53621 1224 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 ZNF280AP59817 542 aaPredicted RBP10.35□□□□□ -0.75
GGA3-201ENST00000537686 BTG3Q14201 252 aaPredicted RBP10.35□□□□□ -0.75
GGA3-201ENST00000537686 HYIQ5T013 277 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 AP1ARQ63HQ0 302 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 CES3Q6UWW8 571 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 DLK2Q6UY11 383 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 IRF2BP2Q7Z5L9 587 aa10.35□□□□□ -0.75
GGA3-201ENST00000537686 PTAR1Q7Z6K3 402 aaPredicted RBP10.35□□□□□ -0.75
GGA3-201ENST00000537686 TAGAPQ8N103 731 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms