RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 LRRC63Q05C16 580 aa10.14□□□□□ -0.79
CHD4-207ENST00000537634 PDE4CQ08493 712 aa10.14□□□□□ -0.79
CHD4-207ENST00000537634 ADIGQ0VDE8 80 aa10.14□□□□□ -0.79
CHD4-207ENST00000537634 BST2Q10589 180 aaKnown RBP10.14□□□□□ -0.79
CHD4-207ENST00000537634 FOXC1Q12948 553 aa10.14□□□□□ -0.79
CHD4-207ENST00000537634 E2F5Q15329 346 aa10.14□□□□□ -0.79
CHD4-207ENST00000537634 COBLL1Q53SF7 1204 aa10.14□□□□□ -0.79
CHD4-207ENST00000537634 FYB2Q5VWT5 728 aa10.14□□□□□ -0.79
CHD4-207ENST00000537634 ANKS1BQ7Z6G8 1248 aa10.14□□□□□ -0.79
CHD4-207ENST00000537634 FMR1NBQ8N0W7 255 aaPredicted RBP10.14□□□□□ -0.79
CHD4-207ENST00000537634 SIX6OS1Q8N1H7 587 aa10.14□□□□□ -0.79
CHD4-207ENST00000537634 HDDC3Q8N4P3 179 aa10.14□□□□□ -0.79
CHD4-207ENST00000537634 TRIML1Q8N9V2 468 aa10.14□□□□□ -0.79
CHD4-207ENST00000537634 DEFB124Q8NES8 71 aa10.14□□□□□ -0.79
CHD4-207ENST00000537634 RNF139Q8WU17 664 aa10.14□□□□□ -0.79
CHD4-207ENST00000537634 SMARCE1Q969G3 411 aa10.14□□□□□ -0.79
CHD4-207ENST00000537634 GTPBP2Q9BX10 602 aaKnown RBP10.14□□□□□ -0.79
CHD4-207ENST00000537634 ULBP1Q9BZM6 244 aa10.14□□□□□ -0.79
CHD4-207ENST00000537634 SLC6A17Q9H1V8 727 aa10.14□□□□□ -0.79
CHD4-207ENST00000537634 AGO1Q9UL18 857 aaKnown RBP10.14□□□□□ -0.79
CHD4-207ENST00000537634 COQ4Q9Y3A0 265 aa10.14□□□□□ -0.79
CHD4-207ENST00000537634 ASCC3Q8N3C0 2202 aaKnown RBP10.14□□□□□ -0.79
CHD4-207ENST00000537634 KMT2BQ9UMN6 2715 aaPredicted RBP10.13□□□□□ -0.79
CHD4-207ENST00000537634 TRIM49BA6NDI0 452 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 WASH3PC4AMC7 463 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 TULP2O00295 520 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 PSMA7O14818 248 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 SYNCRIPO60506 623 aaKnown RBP10.13□□□□□ -0.79
CHD4-207ENST00000537634 SETSIPP0DME0 302 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 TBXAS1P24557 533 aaPredicted RBP10.13□□□□□ -0.79
CHD4-207ENST00000537634 IL12RB1P42701 662 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 HARS2P49590 506 aaKnown RBP10.13□□□□□ -0.79
CHD4-207ENST00000537634 ZNF132P52740 706 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 PMS1P54277 932 aaKnown RBP10.13□□□□□ -0.79
CHD4-207ENST00000537634 ARID5AQ03989 594 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 LRMPQ12912 555 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 STIM1Q13586 685 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 EIF4HQ15056 248 aaKnown RBP10.13□□□□□ -0.79
CHD4-207ENST00000537634 GEN1Q17RS7 908 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 FUT11Q495W5 492 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 SYCP2LQ5T4T6 812 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 ANKRD40Q6AI12 368 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 PM20D1Q6GTS8 502 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 FMNL3Q8IVF7 1028 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 SLC41A1Q8IVJ1 513 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 ZC3H3Q8IXZ2 948 aaKnown RBP10.13□□□□□ -0.79
CHD4-207ENST00000537634 RGL4Q8IZJ4 473 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 CPXM2Q8N436 756 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 DDI1Q8WTU0 396 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 FOXJ1Q92949 421 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 SLC35C1Q96A29 364 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 P2RY11Q96G91 374 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 SLC2A11Q9BYW1 496 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 CIPCQ9C0C6 399 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 PRDM16Q9HAZ2 1276 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 CAPN10Q9HC96 672 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 METTL14Q9HCE5 456 aaKnown RBP10.13□□□□□ -0.79
CHD4-207ENST00000537634 CD93Q9NPY3 652 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 FSCN3Q9NQT6 498 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 THAP10Q9P2Z0 257 aaPredicted RBP10.13□□□□□ -0.79
CHD4-207ENST00000537634 SUSD2Q9UGT4 822 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 HBS1LQ9Y450 684 aaKnown RBP10.13□□□□□ -0.79
CHD4-207ENST00000537634 PCDH15Q96QU1 1955 aa10.13□□□□□ -0.79
CHD4-207ENST00000537634 MEI4A8MW99 385 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 O00370 1275 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 ARHGAP33O14559 1287 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 OPHN1O60890 802 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 SYPP08247 313 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 VDRP11473 427 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 GNSP15586 552 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 CD6P30203 668 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 FMO5P49326 533 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 ZNF445P59923 1031 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 BECN1Q14457 450 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 ZNF234Q14588 700 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 TRIP4Q15650 581 aaPredicted RBP10.12□□□□□ -0.79
CHD4-207ENST00000537634 PLEKHG6Q3KR16 790 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 CCDC40Q4G0X9 1142 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 MPPE1Q53F39 396 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 WDR45BQ5MNZ6 344 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 BSPRYQ5W0U4 402 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 SERPINA13PQ6UXR4 307 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 BHLHA9Q7RTU4 235 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 METTL3Q86U44 580 aaKnown RBP10.12□□□□□ -0.79
CHD4-207ENST00000537634 FAM217AQ8IXS0 508 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 MINDY1Q8N5J2 469 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 UBA3Q8TBC4 463 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 NDRG1Q92597 394 aaKnown RBP10.12□□□□□ -0.79
CHD4-207ENST00000537634 EDEM1Q92611 657 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 ERCC4Q92889 916 aaPredicted RBP10.12□□□□□ -0.79
CHD4-207ENST00000537634 ZNF419Q96HQ0 510 aaPredicted RBP10.12□□□□□ -0.79
CHD4-207ENST00000537634 PIWIL1Q96J94 861 aaKnown RBP10.12□□□□□ -0.79
CHD4-207ENST00000537634 NT5C1BQ96P26 610 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 ELOVL2Q9NXB9 296 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 KIAA1257Q9ULG3 409 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 CKAP5Q14008 2032 aa10.12□□□□□ -0.79
CHD4-207ENST00000537634 YJEFN3A6XGL0 299 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 UPK3BL1B0FP48 263 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 UPK3BL2E5RIL1 263 aa10.11□□□□□ -0.79
CHD4-207ENST00000537634 E7ENQ6 273 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms