RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 GYS1P13807 737 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 GLULP15104 373 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 PRKACAP17612 351 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 NUDT1P36639 197 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 ETFBP38117 255 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 COPZ1P61923 177 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 RAB39AQ14964 217 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 NRF1Q16656 503 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 NDUFAF5Q5TEU4 345 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 GJB7Q6PEY0 223 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 TTC33Q6PID6 262 aaPredicted RBP8.78□□□□□ -1
SRGAP1-202ENST00000537556 LINC00299Q6ZSB3 139 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 TMEM26Q6ZUK4 368 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 KRT25Q7Z3Z0 450 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 COLGALT2Q8IYK4 626 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.78□□□□□ -1
SRGAP1-202ENST00000537556 MAGEB6Q8N7X4 407 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 EPS8L1Q8TE68 723 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 DNAJC19Q96DA6 116 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 KLF6Q99612 283 aaPredicted RBP8.78□□□□□ -1
SRGAP1-202ENST00000537556 AGPAT1Q99943 283 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 PKP2Q99959 881 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 NOL6Q9H6R4 1146 aaKnown RBP8.78□□□□□ -1
SRGAP1-202ENST00000537556 DIABLOQ9NR28 239 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 GIMAP4Q9NUV9 329 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 SERPINA10Q9UK55 444 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 PRSS51A0A1B0GVH4 220 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 MTSS1O43312 755 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 CALUO43852 315 aaPredicted RBP8.78□□□□□ -1
SRGAP1-202ENST00000537556 CDH1P12830 882 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 CCNCP24863 283 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 SLC18A2Q05940 514 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 MORF4L2Q15014 288 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 KRT28Q7Z3Y7 464 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 GALNT7Q86SF2 657 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 ZC3H7AQ8IWR0 971 aaKnown RBP8.78□□□□□ -1
SRGAP1-202ENST00000537556 MZB1Q8WU39 189 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 AFG1LQ8WV93 481 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 ZUFSPQ96AP4 578 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 SH3YL1Q96HL8 342 aaPredicted RBP8.78□□□□□ -1
SRGAP1-202ENST00000537556 DHRS4Q9BTZ2 278 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 PARVAQ9NVD7 372 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 SNTG2Q9NY99 539 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 HMGXB4Q9UGU5 601 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 NFASCO94856 1347 aa8.78□□□□□ -1
SRGAP1-202ENST00000537556 ROBO2Q9HCK4 1378 aa8.77□□□□□ -1
SRGAP1-202ENST00000537556 FAM155AB1AL88 458 aaPredicted RBP8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 COPEO14579 308 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 B3GALNT1O75752 331 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 ARHGEF15O94989 841 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 NTRK1P04629 796 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 CYP1A2P05177 515 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 NELFEP18615 380 aaKnown RBP8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 STAT3P40763 770 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 NKX2-5P52952 324 aaPredicted RBP8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 DSTNP60981 165 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 B2MP61769 119 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 IKBKEQ14164 716 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 HERC3Q15034 1050 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 LRIT3Q3SXY7 679 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 MGAT5BQ3V5L5 792 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 NEK5Q6P3R8 708 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 FAM122CQ6P4D5 195 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 ZNF790Q6PG37 636 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 NEK8Q86SG6 692 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 LILRA2Q8N149 483 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 ZNF786Q8N393 782 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 AFAP1L2Q8N4X5 818 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 ZNF564Q8TBZ8 553 aaPredicted RBP8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 FNIP1Q8TF40 1166 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 SLC5A5Q92911 643 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 SNX18Q96RF0 628 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 NAP1L4Q99733 375 aaKnown RBP8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 ANO3Q9BYT9 981 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 ACSS3Q9H6R3 686 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 NANOGQ9H9S0 305 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 WDR6Q9NNW5 1121 aaKnown RBP8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 MARCOQ9UEW3 520 aaPredicted RBP8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 ZNF229Q9UJW7 825 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 TESMINQ9Y4I5 508 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 MYH14Q7Z406 1995 aaKnown RBP8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 TECPR2O15040 1411 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 C7orf72A4D263 438 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 FAM25EA8MYX2 175 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 SLC16A3O15427 465 aaKnown RBP8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 PRKAB2O43741 272 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 VEGFAP15692 232 aaPredicted RBP8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 RRM2P31350 389 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 IDUAP35475 653 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 SLC26A2P50443 739 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 FXR2P51116 673 aaKnown RBP eCLIP8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 FAAP100Q0VG06 881 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 CDC20Q12834 499 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 PMS2P3Q13401 168 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 FASTKD3Q14CZ7 662 aaKnown RBP8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 LLGL1Q15334 1064 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 INAVAQ3KP66 663 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 UBE2UQ5VVX9 321 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 CIAPIN1Q6FI81 312 aa8.77□□□□□ -1.01
SRGAP1-202ENST00000537556 FAM117BQ6P1L5 589 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms