RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 ANO4Q32M45 955 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 DPCR1Q3MIW9 517 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 C10orf76Q5T2E6 689 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 LYSMD4Q5XG99 296 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 TMEM270Q6UE05 265 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 BHLHA9Q7RTU4 235 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 ARHGEF19Q8IW93 802 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 PPM1KQ8N3J5 372 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 DEFB119Q8N690 84 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 ZNF513Q8N8E2 541 aaPredicted RBP13.05□□□□□ -0.32
PRKDC-207ENST00000536483 TFAP2BQ92481 460 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 KAT5Q92993 513 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 HSFY1Q96LI6 401 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 ZSWIM1Q9BR11 485 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 ADAM33Q9BZ11 813 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 NACA2Q9H009 215 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 INTS2Q9H0H0 1204 aaKnown RBP13.05□□□□□ -0.32
PRKDC-207ENST00000536483 HESX1Q9UBX0 185 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 DNMT3LQ9UJW3 386 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 HCN2Q9UL51 889 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 ZMIZ1Q9ULJ6 1067 aa13.05□□□□□ -0.32
PRKDC-207ENST00000536483 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.05□□□□□ -0.32
PRKDC-207ENST00000536483 IGF2RP11717 2491 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 CACNA1EQ15878 2313 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 TBX18O95935 607 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 ZBED1O96006 694 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 RALAP11233 206 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 GABRG2P18507 467 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 GOLGA7BQ2TAP0 167 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 SPDYCQ5MJ68 293 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 SLC23A3Q6PIS1 610 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 TRIM65Q6PJ69 517 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 Q6ZNB5 142 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 MIB1Q86YT6 1006 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 TERB1Q8NA31 727 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 GPT2Q8TD30 523 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 SCNM1Q9BWG6 230 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 TMEM121BQ9BXQ6 578 aaPredicted RBP13.04□□□□□ -0.32
PRKDC-207ENST00000536483 FSCN3Q9NQT6 498 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 CNGB3Q9NQW8 809 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 MARK1Q9P0L2 795 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 PILRBQ9UKJ0 227 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 PCDHB4Q9Y5E5 795 aa13.04□□□□□ -0.32
PRKDC-207ENST00000536483 SPEGQ15772 3267 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 ZZEF1O43149 2961 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 PI4KAP42356 2102 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 TULP2O00295 520 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 GABBR2O75899 941 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 CFIP05156 583 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 HOXB2P14652 356 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 CD19P15391 556 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 DPP6P42658 865 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 TKTL1P51854 596 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 COG7P83436 770 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 RPL6Q02878 288 aaKnown RBP13.03□□□□□ -0.32
PRKDC-207ENST00000536483 GOLGA8FQ08AF8 430 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 GOLGA8DPQ0D2H9 430 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 NFKBIBQ15653 356 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 MAN2A1Q16706 1144 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 PREPLQ4J6C6 727 aaPredicted RBP13.03□□□□□ -0.32
PRKDC-207ENST00000536483 KIAA1211LQ6NV74 962 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 DPY19L2P1Q6NXN4 242 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 GBP6Q6ZN66 633 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 NUDT18Q6ZVK8 323 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 RRAGAQ7L523 313 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 TRMT11Q7Z4G4 463 aaKnown RBP13.03□□□□□ -0.32
PRKDC-207ENST00000536483 FAM114A1Q8IWE2 563 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 KDF1Q8NAX2 398 aaPredicted RBP13.03□□□□□ -0.32
PRKDC-207ENST00000536483 RBBP8NLQ8NC74 664 aaPredicted RBP13.03□□□□□ -0.32
PRKDC-207ENST00000536483 ENOX1Q8TC92 643 aaKnown RBP13.03□□□□□ -0.32
PRKDC-207ENST00000536483 KCNV2Q8TDN2 545 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 STK32AQ8WU08 396 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 IRGQQ8WZA9 623 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 ERLEC1Q96DZ1 483 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 SLC32A1Q9H598 525 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 CALCOCO1Q9P1Z2 691 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 NAGPAQ9UK23 515 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 ZNF510Q9Y2H8 683 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 STARD13Q9Y3M8 1113 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 PCNX2A6NKB5 2137 aa13.03□□□□□ -0.32
PRKDC-207ENST00000536483 SPAARA0A1B0GVQ0 90 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 A0A1W2PQF6 199 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 AP5Z1O43299 807 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 PON1P27169 355 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 NTSR1P30989 418 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 GPD2P43304 727 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 ATXN3P54252 364 aaPredicted RBP13.02□□□□□ -0.33
PRKDC-207ENST00000536483 MFAP3P55082 362 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 YWHAGP61981 247 aaKnown RBP eCLIP13.02□□□□□ -0.33
PRKDC-207ENST00000536483 EXOC3L4Q17RC7 722 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 DUOXA1Q1HG43 343 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 MIIPQ5JXC2 388 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 PEAR1Q5VY43 1037 aaPredicted RBP13.02□□□□□ -0.33
PRKDC-207ENST00000536483 EGFLAMQ63HQ2 1017 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 GRAMD4Q6IC98 578 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 PMF1Q6P1K2 205 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 SLC36A4Q6YBV0 504 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 TPGS1Q6ZTW0 290 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 BEND5Q7L4P6 421 aa13.02□□□□□ -0.33
PRKDC-207ENST00000536483 CHPFQ8IZ52 775 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms