RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 PIH1D1Q9NWS0 290 aaKnown RBP2.9□□□□□ -1.95
SKA3-207ENST00000536239 OGFRQ9NZT2 677 aa2.9□□□□□ -1.95
SKA3-207ENST00000536239 CDY1Q9Y6F8 540 aa2.9□□□□□ -1.95
SKA3-207ENST00000536239 TNKSO95271 1327 aa2.9□□□□□ -1.95
SKA3-207ENST00000536239 SPATA31A1Q5TZJ5 1347 aa2.9□□□□□ -1.95
SKA3-207ENST00000536239 A8MVJ9 347 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 PRPF4O43172 522 aaKnown RBP eCLIP2.89□□□□□ -1.95
SKA3-207ENST00000536239 SRGAP2O75044 1071 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 LDB3O75112 727 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 CD19P15391 556 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 CAPN2P17655 700 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 CCND1P24385 295 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 MTA1Q13330 715 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 KRTAP24-1Q3LI83 254 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 INO80DQ53TQ3 878 aaPredicted RBP2.89□□□□□ -1.95
SKA3-207ENST00000536239 RBM44Q6ZP01 1051 aaKnown RBP2.89□□□□□ -1.95
SKA3-207ENST00000536239 CATIPQ7Z7H3 387 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 ANKRD23Q86SG2 305 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 EXOC8Q8IYI6 725 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 FAM71DQ8N9W8 422 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 PLBD2Q8NHP8 589 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 TSPAN18Q96SJ8 248 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 SCAPERQ9BY12 1400 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 PANK2Q9BZ23 570 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 C6orf106Q9H6K1 298 aaPredicted RBP2.89□□□□□ -1.95
SKA3-207ENST00000536239 ARMT1Q9H993 441 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 ZNF556Q9HAH1 456 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 UPF2Q9HAU5 1272 aaKnown RBP2.89□□□□□ -1.95
SKA3-207ENST00000536239 XPNPEP3Q9NQH7 507 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 NCKIPSDQ9NZQ3 722 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 NKX1-2Q9UD57 310 aaPredicted RBP2.89□□□□□ -1.95
SKA3-207ENST00000536239 AGO2Q9UKV8 859 aaKnown RBP2.89□□□□□ -1.95
SKA3-207ENST00000536239 NOL7Q9UMY1 257 aaKnown RBP2.89□□□□□ -1.95
SKA3-207ENST00000536239 SCRIBQ14160 1630 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 KIF26BQ2KJY2 2108 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 DOCK7Q96N67 2140 aa2.89□□□□□ -1.95
SKA3-207ENST00000536239 IBTKQ9P2D0 1353 aaPredicted RBP2.88□□□□□ -1.95
SKA3-207ENST00000536239 CEP162Q5TB80 1403 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.88□□□□□ -1.95
SKA3-207ENST00000536239 C16orf96A6NNT2 1141 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 H0YGN5 161 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 BTN3A1O00481 513 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 CTAGE5O15320 804 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 CD3EAPO15446 510 aaKnown RBP2.88□□□□□ -1.95
SKA3-207ENST00000536239 RGS10O43665 173 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 DHX16O60231 1041 aaKnown RBP2.88□□□□□ -1.95
SKA3-207ENST00000536239 UGDHO60701 494 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 PRAMEF2O60811 474 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 COMPP49747 757 aaPredicted RBP2.88□□□□□ -1.95
SKA3-207ENST00000536239 GATMP50440 423 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 GUCY2FP51841 1108 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 JAK3P52333 1124 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 ARFIP2P53365 341 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 DDR1Q08345 913 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 FAM50AQ14320 339 aaKnown RBP2.88□□□□□ -1.95
SKA3-207ENST00000536239 ZNF783Q6ZMS7 281 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 CCDC91Q7Z6B0 441 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 SRGAP1Q7Z6B7 1085 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 CHMP4CQ96CF2 233 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 MTMR8Q96EF0 704 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 PHF21BQ96EK2 531 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 MVB12AQ96EY5 273 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 P2RY11Q96G91 374 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 PIMREGQ9BSJ6 248 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 TRIM54Q9BYV2 358 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 MOV10Q9HCE1 1003 aaKnown RBP2.88□□□□□ -1.95
SKA3-207ENST00000536239 THSD1Q9NS62 852 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 PLK2Q9NYY3 685 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 ATP8A1Q9Y2Q0 1164 aa2.88□□□□□ -1.95
SKA3-207ENST00000536239 CCDC144AA2RUR9 1427 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 CCDC196A0A1B0GTZ2 297 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 A0A1B0GUV1 79 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 TMEM233B4DJY2 109 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 MPHOSPH10O00566 681 aaKnown RBP2.87□□□□□ -1.95
SKA3-207ENST00000536239 COQ9O75208 318 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 DDNO94850 711 aaPredicted RBP2.87□□□□□ -1.95
SKA3-207ENST00000536239 RASAL1O95294 804 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 IPO7O95373 1038 aaKnown RBP2.87□□□□□ -1.95
SKA3-207ENST00000536239 HSP90AB1P08238 724 aaKnown RBP2.87□□□□□ -1.95
SKA3-207ENST00000536239 HOXC6P09630 235 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 HSPA5P11021 654 aaKnown RBP2.87□□□□□ -1.95
SKA3-207ENST00000536239 PKMP14618 531 aaKnown RBP2.87□□□□□ -1.95
SKA3-207ENST00000536239 ST6GAL1P15907 406 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 ADRA1DP25100 572 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 GSCP56915 257 aaPredicted RBP2.87□□□□□ -1.95
SKA3-207ENST00000536239 TXNL4AP83876 142 aaKnown RBP2.87□□□□□ -1.95
SKA3-207ENST00000536239 FGL2Q14314 439 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 SYCP1Q15431 976 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 INSCQ1MX18 579 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 IZUMO4Q1ZYL8 232 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 MRGPRG-AS1Q2M3A8 158 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 TTLL5Q6EMB2 1281 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 SDE2Q6IQ49 451 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 ZDHHC24Q6UX98 284 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 MORC1Q86VD1 984 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 CHPFQ8IZ52 775 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 ADGRF4Q8IZF3 695 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 FAM9BQ8IZU0 186 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 MPP5Q8N3R9 675 aa2.87□□□□□ -1.95
SKA3-207ENST00000536239 KBTBD7Q8WVZ9 684 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms