RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 BPGMP07738 259 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 ACADSBP45954 432 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 BCAT1P54687 386 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 BMPR2Q13873 1038 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 CHI3L2Q15782 390 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 SLC27A1Q6PCB7 646 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 DSTYKQ6XUX3 929 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 MOB2Q70IA6 237 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 CRLF3Q8IUI8 442 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 KIRREL3Q8IZU9 778 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 MPP5Q8N3R9 675 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 TEX9Q8N6V9 391 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 SNX27Q96L92 541 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 NMUR2Q9GZQ4 415 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 CXCL16Q9H2A7 254 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 DONSONQ9NYP3 566 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 DTLQ9NZJ0 730 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 STOML1Q9UBI4 398 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 MORF4L1Q9UBU8 362 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 DICER1Q9UPY3 1922 aaKnown RBP16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 H0Y3Z8 333 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 SNNO75324 88 aaPredicted RBP16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 FDFT1P37268 417 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 CDC42EP1Q00587 391 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 TTLL12Q14166 644 aaPredicted RBP16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 DBN1Q16643 649 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 RFWD3Q6PCD5 774 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 KYAT3Q6YP21 454 aaKnown RBP16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 RINLQ6ZS11 566 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 STRADAQ7RTN6 431 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 TTC7BQ86TV6 843 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 ARHGAP24Q8N264 748 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 SMC1BQ8NDV3 1235 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 TFB1MQ8WVM0 346 aaKnown RBP16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 HTR3CQ8WXA8 447 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 PRR11Q96HE9 360 aaPredicted RBP16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 HSFY1Q96LI6 401 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 WWP1Q9H0M0 922 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 C2orf71A6NGG8 1288 aa16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 SDR42E2A6NKP2 422 aa16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 CAPN14A8MX76 684 aa16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 CYB561D2O14569 222 aa16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 DGKIO75912 1065 aa16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 GNL1P36915 607 aaPredicted RBP16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 ATXN1P54253 815 aaKnown RBP16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 NBPF20Q3BBV1 942 aa16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 HSF5Q4G112 596 aaPredicted RBP16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 TEX44Q53QW1 395 aa16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 ALKAL1Q6UXT8 129 aa16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 TMPRSS6Q8IU80 811 aa16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 CCNJLQ8IV13 435 aa16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 ARID3BQ8IVW6 561 aaPredicted RBP16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 STKLD1Q8NE28 680 aa16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 ACMSDQ8TDX5 336 aa16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 CLEC4CQ8WTT0 213 aa16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 DEPDC1BQ8WUY9 529 aa16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 OLFM3Q96PB7 478 aa16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 KCTD15Q96SI1 283 aaPredicted RBP16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 RCOR3Q9P2K3 495 aaPredicted RBP16.55■□□□□ 0.24
CHMP1A-202ENST00000535997 CAPN15O75808 1086 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 ARL4AP40617 200 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 ADCYAP1R1P41586 468 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 GRIA1P42261 906 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 CCNA1P78396 465 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 KIZQ2M2Z5 673 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 C9orf57Q5W0N0 161 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 STEAP4Q687X5 459 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 NCBP2-AS2Q69YL0 99 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 ALYREFQ86V81 257 aaKnown RBP16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 PSTKQ8IV42 348 aaKnown RBP16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 ADGRF2Q8IZF7 708 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 GPRC5AQ8NFJ5 357 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 NLGN2Q8NFZ4 835 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 TRIM56Q9BRZ2 755 aaKnown RBP16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 MAGEB5Q9BZ81 275 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 DNAI2Q9GZS0 605 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 ADAMTS10Q9H324 1103 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 DPEP3Q9H4B8 488 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 PCMTD2Q9NV79 361 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 THAP1Q9NVV9 213 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 TUBGCP4Q9UGJ1 667 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 A0A0A0MRY4 1105 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 LCP1P13796 627 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 ATP6V1C1P21283 382 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 AMPD1P23109 780 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 ADORA2AP29274 412 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 BLMHQ13867 455 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 PCBP1Q15365 356 aaKnown RBP eCLIP16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 EFHC1Q5JVL4 640 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 LRRC8BQ6P9F7 803 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 CCDC185Q8N715 623 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 GTF3C2Q8WUA4 911 aaPredicted RBP16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 C18orf25Q96B23 403 aaPredicted RBP16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 SPATA13Q96N96 652 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 ARMCX1Q9P291 453 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 UBQLN1Q9UMX0 589 aaKnown RBP16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 USP3Q9Y6I4 520 aa16.54■□□□□ 0.24
CHMP1A-202ENST00000535997 PDGFRBP09619 1106 aa16.53■□□□□ 0.24
CHMP1A-202ENST00000535997 MATKP42679 507 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms