RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 COX16Q9P0S2 106 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 GABRQQ9UN88 632 aa13.85□□□□□ -0.19
VPS33B-202ENST00000535906 ZNF638Q14966 1978 aaKnown RBP13.85□□□□□ -0.19
VPS33B-202ENST00000535906 ARL5CA6NH57 179 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 DAB1O75553 588 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 SKIV2L2P42285 1042 aaKnown RBP13.84□□□□□ -0.19
VPS33B-202ENST00000535906 MAGEA6P43360 314 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 YWHAGP61981 247 aaKnown RBP eCLIP13.84□□□□□ -0.19
VPS33B-202ENST00000535906 KCNJ2P63252 427 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 DNAJC3Q13217 504 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 PREPLQ4J6C6 727 aaPredicted RBP13.84□□□□□ -0.19
VPS33B-202ENST00000535906 AGMOQ6ZNB7 445 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 CCDC91Q7Z6B0 441 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 CDKL3Q8IVW4 592 aaPredicted RBP13.84□□□□□ -0.19
VPS33B-202ENST00000535906 SPOCK2Q92563 424 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 CYTH2Q99418 400 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 NPY6RQ99463 290 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 KRT82Q9NSB4 513 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 TMEM30AQ9NV96 361 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 PHTF1Q9UMS5 762 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 MYBPHLA2RUH7 354 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 NRP1O14786 923 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 GCATO75600 419 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 NOS2P35228 1153 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 SCNN1GP51170 649 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 TKTL1P51854 596 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 TRIM32Q13049 653 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 CBLBQ13191 982 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 BNIPLQ7Z465 357 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 PRPF39Q86UA1 669 aaKnown RBP13.84□□□□□ -0.19
VPS33B-202ENST00000535906 RSPH3Q86UC2 560 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 SERINC5Q86VE9 423 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 NETO2Q8NC67 525 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 KLHL29Q96CT2 875 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 ZIC5Q96T25 663 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 KCNK16Q96T55 309 aa13.84□□□□□ -0.19
VPS33B-202ENST00000535906 CASTOR2A6NHX0 329 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 FAM155AB1AL88 458 aaPredicted RBP13.83□□□□□ -0.19
VPS33B-202ENST00000535906 GOLGA8RI6L899 631 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 M0QYT0 321 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 C1QAP02745 245 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 FYNP06241 537 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 FAM163BP0C2L3 166 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 FAM200BP0CF97 657 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 ARL4AP40617 200 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 CACNA2D1P54289 1103 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 ASRGL1Q7L266 308 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 SIX6OS1Q8N1H7 587 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 ANKLE1Q8NAG6 615 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 RNF169Q8NCN4 708 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 CFAP36Q96G28 342 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 PCED1BQ96HM7 432 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 QKIQ96PU8 341 aaKnown RBP eCLIP13.83□□□□□ -0.19
VPS33B-202ENST00000535906 KLF6Q99612 283 aaPredicted RBP13.83□□□□□ -0.19
VPS33B-202ENST00000535906 SMOQ99835 787 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 PLAC1Q9HBJ0 212 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 ARHGEF4Q9NR80 690 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 ARHGEF3Q9NR81 526 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 CHST12Q9NRB3 414 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 BAIAP2L1Q9UHR4 511 aa13.83□□□□□ -0.19
VPS33B-202ENST00000535906 ZWINTO95229 277 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 CCNB1P14635 433 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 VAV1P15498 845 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 MGAT3Q09327 533 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 NME3Q13232 169 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 ZNF534Q76KX8 674 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 GPRIN1Q7Z2K8 1008 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 CEP57Q86XR8 500 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 VPS52Q8N1B4 723 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 ZMIZ2Q8NF64 920 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 LRRC8CQ8TDW0 803 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 SLC44A1Q8WWI5 657 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 OLFM3Q96PB7 478 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 SLC2A13Q96QE2 648 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 LGMNQ99538 433 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 SYT15Q9BQS2 421 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 FRMD8Q9BZ67 464 aaPredicted RBP13.83□□□□□ -0.2
VPS33B-202ENST00000535906 POPDC2Q9HBU9 364 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 PIGVQ9NUD9 493 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 TSC2P49815 1807 aa13.83□□□□□ -0.2
VPS33B-202ENST00000535906 MYO18AQ92614 2054 aaKnown RBP13.82□□□□□ -0.2
VPS33B-202ENST00000535906 YJEFN3A6XGL0 299 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 E7ENQ6 273 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 EDF1O60869 148 aaKnown RBP13.82□□□□□ -0.2
VPS33B-202ENST00000535906 CAPN15O75808 1086 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 DGKIO75912 1065 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 LHX1P48742 406 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 PTK7Q13308 1070 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 HEATR6Q6AI08 1181 aaKnown RBP13.82□□□□□ -0.2
VPS33B-202ENST00000535906 LVRNQ6Q4G3 990 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 DSTYKQ6XUX3 929 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 CTU1Q7Z7A3 348 aaKnown RBP13.82□□□□□ -0.2
VPS33B-202ENST00000535906 ULBP1Q9BZM6 244 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 C12orf65Q9H3J6 166 aaKnown RBP13.82□□□□□ -0.2
VPS33B-202ENST00000535906 SLCO1B3Q9NPD5 702 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 ZC3H7BQ9UGR2 993 aaKnown RBP13.82□□□□□ -0.2
VPS33B-202ENST00000535906 TTLL3Q9Y4R7 772 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 MFSD11O43934 449 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 MGEA5O60502 916 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 SPAG6O75602 509 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms