RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 CLEC4GQ6UXB4 293 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 TMPRSS9Q7Z410 1059 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 Q8NA96 180 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 TOR1AIP2Q8NFQ8 470 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 RP9Q8TA86 221 aaKnown RBP3.8□□□□□ -1.8
SNHG1-202ENST00000535689 CAGE1Q8TC20 777 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 WDR60Q8WVS4 1066 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 FBXL20Q96IG2 436 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 NUDT22Q9BRQ3 303 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 ACTRT3Q9BYD9 372 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 STK33Q9BYT3 514 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 AMBRA1Q9C0C7 1298 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 ADARB2Q9NS39 739 aaKnown RBP3.8□□□□□ -1.8
SNHG1-202ENST00000535689 KCTD5Q9NXV2 234 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 DNAJB11Q9UBS4 358 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 SRP68Q9UHB9 627 aaKnown RBP3.8□□□□□ -1.8
SNHG1-202ENST00000535689 PGAP2Q9UHJ9 254 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 DAAM1Q9Y4D1 1078 aa3.8□□□□□ -1.8
SNHG1-202ENST00000535689 ARFGEF2Q9Y6D5 1785 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 A0A1W2PP64 1363 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 PODXLO00592 558 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 WNT10BO00744 389 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 YY2O15391 372 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 CD3EAPO15446 510 aaKnown RBP3.79□□□□□ -1.8
SNHG1-202ENST00000535689 KCNQ3O43525 872 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 PLA2G6O60733 806 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 A1BGP04217 495 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 EGR2P11161 476 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-202ENST00000535689 GATMP50440 423 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 TPTEP56180 551 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 HUNKP57058 714 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 KRTAP10-2P60368 255 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 MAPKAPK3Q16644 382 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 GEN1Q17RS7 908 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.79□□□□□ -1.8
SNHG1-202ENST00000535689 ATPAF1Q5TC12 328 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-202ENST00000535689 KAZNQ674X7 775 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 RGS7BPQ6MZT1 257 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-202ENST00000535689 RGMBQ6NW40 437 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 ANKRD16Q6P6B7 361 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 VWA1Q6PCB0 445 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 FBXO46Q6PJ61 603 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-202ENST00000535689 ZNF551Q7Z340 670 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-202ENST00000535689 IZUMO1Q8IYV9 350 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 FAM109AQ8N4B1 249 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 RNF152Q8N8N0 203 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 CNBD1Q8NA66 436 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 NSUN7Q8NE18 718 aaKnown RBP3.79□□□□□ -1.8
SNHG1-202ENST00000535689 OR56A3Q8NH54 315 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 MAML1Q92585 1016 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 RSC1A1Q92681 617 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 NELL1Q92832 810 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 MUL1Q969V5 352 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 FKBP10Q96AY3 582 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 GRAMD1AQ96CP6 724 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 LRRC46Q96FV0 321 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 PBKQ96KB5 322 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 HIST1H2AAQ96QV6 131 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 NEU1Q99519 415 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 AIFM2Q9BRQ8 373 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 WDR12Q9GZL7 423 aaKnown RBP3.79□□□□□ -1.8
SNHG1-202ENST00000535689 SNX15Q9NRS6 342 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 DKK4Q9UBT3 224 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 MAFFQ9ULX9 164 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 MAN2B2Q9Y2E5 1009 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 MAP3K2Q9Y2U5 619 aa3.79□□□□□ -1.8
SNHG1-202ENST00000535689 CARMIL3Q8ND23 1372 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 SOS1Q07889 1333 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-202ENST00000535689 RNF123Q5XPI4 1314 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 CDHR2Q9BYE9 1310 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 EFCAB8A8MWE9 144 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 QSOX1O00391 747 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 DCLK1O15075 740 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 RRP9O43818 475 aaKnown RBP3.78□□□□□ -1.8
SNHG1-202ENST00000535689 SRGAP2O75044 1071 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 USP12O75317 370 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 TCEA3O75764 348 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 ZNF202O95125 648 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 SPDEFO95238 335 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 VIPP01282 170 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 CYP19A1P11511 503 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-202ENST00000535689 MYCLP12524 364 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-202ENST00000535689 CAPN2P17655 700 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 CHRM3P20309 590 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 MMP8P22894 467 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 LIPAP38571 399 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 IL6STP40189 918 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-202ENST00000535689 GDF5P43026 501 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 HSPA7P48741 367 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 PPM1FP49593 454 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-202ENST00000535689 PGDP52209 483 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 INHBEP58166 350 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 MRPS35P82673 323 aaKnown RBP3.78□□□□□ -1.8
SNHG1-202ENST00000535689 CSHL1Q14406 222 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 SLC5A9Q2M3M2 681 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 TRIM71Q2Q1W2 868 aaKnown RBP3.78□□□□□ -1.8
SNHG1-202ENST00000535689 ZNF530Q6P9A1 599 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-202ENST00000535689 Q6ZNX1 250 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 RHOUQ7L0Q8 258 aa3.78□□□□□ -1.8
SNHG1-202ENST00000535689 PARS2Q7L3T8 475 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms