RNA–Protein interactions for RNA: ENST00000535477.5

CLPB-205, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-205ENST00000535477 FAM72AQ5TYM5 149 aa19.48■□□□□ 0.71
CLPB-205ENST00000535477 NCBP2-AS2Q69YL0 99 aa19.48■□□□□ 0.71
CLPB-205ENST00000535477 FAM72DQ6L9T8 149 aa19.48■□□□□ 0.71
CLPB-205ENST00000535477 PRSS55Q6UWB4 352 aaPredicted RBP19.48■□□□□ 0.71
CLPB-205ENST00000535477 FAM43BQ6ZT52 329 aaPredicted RBP19.48■□□□□ 0.71
CLPB-205ENST00000535477 FAM72BQ86X60 149 aa19.48■□□□□ 0.71
CLPB-205ENST00000535477 SCML4Q8N228 414 aa19.48■□□□□ 0.71
CLPB-205ENST00000535477 DQX1Q8TE96 717 aaKnown RBP19.48■□□□□ 0.71
CLPB-205ENST00000535477 FUBP3Q96I24 572 aaKnown RBP eCLIP19.48■□□□□ 0.71
CLPB-205ENST00000535477 SLC9A7Q96T83 725 aa19.48■□□□□ 0.71
CLPB-205ENST00000535477 C11orf49Q9H6J7 331 aa19.48■□□□□ 0.71
CLPB-205ENST00000535477 TMBIM4Q9HC24 238 aa19.48■□□□□ 0.71
CLPB-205ENST00000535477 ARHGEF4Q9NR80 690 aa19.48■□□□□ 0.71
CLPB-205ENST00000535477 VWA8A3KMH1 1905 aa19.48■□□□□ 0.71
CLPB-205ENST00000535477 PTPRDP23468 1912 aa19.48■□□□□ 0.71
CLPB-205ENST00000535477 OR6C75A6NL08 312 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 H3BRJ5 948 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 EEF2KO00418 725 aaKnown RBP19.47■□□□□ 0.71
CLPB-205ENST00000535477 F9P00740 461 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 GABPB1Q06547 395 aaPredicted RBP19.47■□□□□ 0.71
CLPB-205ENST00000535477 MORF4L2Q15014 288 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 KYNUQ16719 465 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 KRT71Q3SY84 523 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 DNAJC21Q5F1R6 531 aaKnown RBP19.47■□□□□ 0.71
CLPB-205ENST00000535477 VSTM1Q6UX27 236 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 TRMT10CQ7L0Y3 403 aaKnown RBP19.47■□□□□ 0.71
CLPB-205ENST00000535477 ZCCHC9Q8N567 271 aaKnown RBP19.47■□□□□ 0.71
CLPB-205ENST00000535477 PGAP3Q96FM1 320 aaPredicted RBP19.47■□□□□ 0.71
CLPB-205ENST00000535477 RBM15Q96T37 977 aaKnown RBP eCLIP19.47■□□□□ 0.71
CLPB-205ENST00000535477 TKTL2Q9H0I9 626 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 USP29Q9HBJ7 922 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 SMIM23A6NLE4 172 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 DGKIO75912 1065 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 NUDT17P0C025 328 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 ITGB8P26012 769 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 BASP1P80723 227 aaKnown RBP19.47■□□□□ 0.71
CLPB-205ENST00000535477 ELAVL2Q12926 359 aaKnown RBP19.47■□□□□ 0.71
CLPB-205ENST00000535477 TERF2Q15554 542 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 ARL13BQ3SXY8 428 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 HP1BP3Q5SSJ5 553 aaPredicted RBP19.47■□□□□ 0.71
CLPB-205ENST00000535477 SYCP2LQ5T4T6 812 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 NUP93Q8N1F7 819 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 TTPALQ9BTX7 342 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 ABCC13Q9NSE7 274 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 DTLQ9NZJ0 730 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 SFMBT1Q9UHJ3 866 aa19.47■□□□□ 0.71
CLPB-205ENST00000535477 A0A1W2PQH9 124 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 TRIM66O15016 1216 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 EIF3BP55884 814 aaKnown RBP19.46■□□□□ 0.71
CLPB-205ENST00000535477 SPOUT1Q5T280 376 aaKnown RBP19.46■□□□□ 0.71
CLPB-205ENST00000535477 ANKRD22Q5VYY1 191 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 RNF19BQ6ZMZ0 732 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 PCGF5Q86SE9 256 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 SCD5Q86SK9 330 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 FAM76AQ8TAV0 307 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 CPT1BQ92523 772 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 NTAN1Q96AB6 310 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 ATP6V1G3Q96LB4 118 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 C9orf72Q96LT7 481 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 SEPT5Q99719 369 aaPredicted RBP19.46■□□□□ 0.71
CLPB-205ENST00000535477 NMUR1Q9HB89 426 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 RCOR3Q9P2K3 495 aaPredicted RBP19.46■□□□□ 0.71
CLPB-205ENST00000535477 SNX10Q9Y5X0 201 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 TLDC2A0PJX2 215 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 CSF2RAP15509 400 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 ACTN2P35609 894 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 NR2C2P49116 596 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 CXCR3P49682 368 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 AIF1P55008 147 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 USP46P62068 366 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 GAD2Q05329 585 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 MGAT5BQ3V5L5 792 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 KCNT2Q6UVM3 1135 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 RFX8Q6ZV50 586 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 PPIL6Q8IXY8 311 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 PRCCQ92733 491 aaPredicted RBP19.46■□□□□ 0.71
CLPB-205ENST00000535477 ARMC5Q96C12 935 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 C8orf48Q96LL4 319 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 TRIM62Q9BVG3 475 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 SAYSD1Q9NPB0 183 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 PRDM4Q9UKN5 801 aa19.46■□□□□ 0.71
CLPB-205ENST00000535477 FNDC1Q4ZHG4 1894 aaPredicted RBP19.46■□□□□ 0.7
CLPB-205ENST00000535477 BCLAF3A2AJT9 711 aaKnown RBP19.45■□□□□ 0.7
CLPB-205ENST00000535477 ANKS3Q6ZW76 656 aa19.45■□□□□ 0.7
CLPB-205ENST00000535477 CRISPLD1Q9H336 500 aa19.45■□□□□ 0.7
CLPB-205ENST00000535477 CWH43Q9H720 699 aa19.45■□□□□ 0.7
CLPB-205ENST00000535477 NINJ2Q9NZG7 142 aa19.45■□□□□ 0.7
CLPB-205ENST00000535477 FARP1Q9Y4F1 1045 aaPredicted RBP19.45■□□□□ 0.7
CLPB-205ENST00000535477 NR2E3Q9Y5X4 410 aa19.45■□□□□ 0.7
CLPB-205ENST00000535477 CDY1Q9Y6F8 540 aa19.45■□□□□ 0.7
CLPB-205ENST00000535477 TCRBV7S3A2A0A539 114 aa19.44■□□□□ 0.7
CLPB-205ENST00000535477 MTMR11A4FU01 709 aa19.44■□□□□ 0.7
CLPB-205ENST00000535477 H7C4K7 107 aa19.44■□□□□ 0.7
CLPB-205ENST00000535477 C2CD2LO14523 706 aa19.44■□□□□ 0.7
CLPB-205ENST00000535477 MSI1O43347 362 aaKnown RBP19.44■□□□□ 0.7
CLPB-205ENST00000535477 MFSD11O43934 449 aa19.44■□□□□ 0.7
CLPB-205ENST00000535477 TTC4O95801 387 aa19.44■□□□□ 0.7
CLPB-205ENST00000535477 MAGEA4P43358 317 aa19.44■□□□□ 0.7
CLPB-205ENST00000535477 TPI1P60174 286 aa19.44■□□□□ 0.7
CLPB-205ENST00000535477 SCAPQ12770 1279 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms