RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ZNF669Q96BR6 464 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-232ENST00000535094 B3GNT5Q9BYG0 378 aa16.4■□□□□ 0.22
MCF2L-232ENST00000535094 WDR55Q9H6Y2 383 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-232ENST00000535094 TNRC6CQ9HCJ0 1690 aaKnown RBP16.4■□□□□ 0.22
MCF2L-232ENST00000535094 C10orf71Q711Q0 1435 aa16.4■□□□□ 0.22
MCF2L-232ENST00000535094 SEC24DO94855 1032 aaPredicted RBP16.39■□□□□ 0.22
MCF2L-232ENST00000535094 CDK7P50613 346 aa16.39■□□□□ 0.22
MCF2L-232ENST00000535094 ATXN1P54253 815 aaKnown RBP16.39■□□□□ 0.22
MCF2L-232ENST00000535094 SLC5A9Q2M3M2 681 aa16.39■□□□□ 0.22
MCF2L-232ENST00000535094 RARS2Q5T160 578 aaKnown RBP16.39■□□□□ 0.22
MCF2L-232ENST00000535094 FAM160B1Q5W0V3 765 aa16.39■□□□□ 0.22
MCF2L-232ENST00000535094 EEF1DP3Q658K8 133 aa16.39■□□□□ 0.22
MCF2L-232ENST00000535094 FAM131BQ86XD5 332 aa16.39■□□□□ 0.22
MCF2L-232ENST00000535094 RNF135Q8IUD6 432 aa16.39■□□□□ 0.22
MCF2L-232ENST00000535094 TWNKQ96RR1 684 aa16.39■□□□□ 0.22
MCF2L-232ENST00000535094 TRPV6Q9H1D0 765 aa16.39■□□□□ 0.22
MCF2L-232ENST00000535094 SEMA6AQ9H2E6 1030 aa16.39■□□□□ 0.22
MCF2L-232ENST00000535094 CYTH4Q9UIA0 394 aa16.39■□□□□ 0.22
MCF2L-232ENST00000535094 HNRNPCP07910 306 aaKnown RBP eCLIP16.39■□□□□ 0.21
MCF2L-232ENST00000535094 VAV1P15498 845 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 FGFR3P22607 806 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 AVPR1AP37288 418 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 SLC25A11Q02978 314 aaKnown RBP16.39■□□□□ 0.21
MCF2L-232ENST00000535094 PDE1CQ14123 709 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-232ENST00000535094 GSTA3Q16772 222 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 SAMD7Q7Z3H4 446 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 SNX32Q86XE0 403 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 PIWIL1Q96J94 861 aaKnown RBP16.39■□□□□ 0.21
MCF2L-232ENST00000535094 RNF157Q96PX1 679 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 MAGEB5Q9BZ81 275 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 TLE6Q9H808 572 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 ACAD9Q9H845 621 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 C20orf96Q9NUD7 363 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-232ENST00000535094 TEX264Q9Y6I9 313 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 KCNK1O00180 336 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 NFICP08651 508 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 TCF7P36402 384 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-232ENST00000535094 NME3Q13232 169 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 GOLGA7BQ2TAP0 167 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 CCDC14Q49A88 953 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 TMEM192Q8IY95 271 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 EME1Q96AY2 570 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 CAAP1Q9H8G2 361 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 SSU72Q9NP77 194 aaKnown RBP16.39■□□□□ 0.21
MCF2L-232ENST00000535094 UBP1Q9NZI7 540 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 TLK1Q9UKI8 766 aa16.39■□□□□ 0.21
MCF2L-232ENST00000535094 METTL18O95568 372 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 KCNA2P16389 499 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 CYP2F1P24903 491 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 ETV4P43268 484 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 CA9Q16790 459 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 ANGEL2Q5VTE6 544 aaKnown RBP16.38■□□□□ 0.21
MCF2L-232ENST00000535094 C15orf39Q6ZRI6 1047 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 ZBTB46Q86UZ6 589 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 XYLT1Q86Y38 959 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 CDKL3Q8IVW4 592 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-232ENST00000535094 PHTF2Q8N3S3 785 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 ARFGAP1Q8N6T3 406 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 PLD5Q8N7P1 536 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 HPDLQ96IR7 371 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 KCNK16Q96T55 309 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 LGMNQ99538 433 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 MRPL1Q9BYD6 325 aaKnown RBP16.38■□□□□ 0.21
MCF2L-232ENST00000535094 TSPAN16Q9UKR8 245 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 SRGAP2BP0DMP2 458 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 CPA3P15088 417 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 NOMO1Q15155 1222 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 HSP90AA5PQ58FG0 334 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 GATA6Q92908 595 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 AZIN2Q96A70 460 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 TMEM176AQ96HP8 235 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 SERPINI1Q99574 410 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 CAB39LQ9H9S4 337 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 MAST2Q6P0Q8 1798 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 C15orf38-AP3S2A0A0A6YYH1 394 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 SCNN1BP51168 640 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 NDST1P52848 882 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 ARPINQ7Z6K5 226 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 FAM156AQ8NDB6 213 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 CPB2Q96IY4 423 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 CATSPER2Q96P56 530 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 PEBP4Q96S96 227 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 CDH22Q9UJ99 828 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 SLC39A10Q9ULF5 831 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 SSX2IPQ9Y2D8 614 aa16.38■□□□□ 0.21
MCF2L-232ENST00000535094 F8W8V4 182 aa16.37■□□□□ 0.21
MCF2L-232ENST00000535094 CSPG5O95196 566 aa16.37■□□□□ 0.21
MCF2L-232ENST00000535094 EDN1P05305 212 aa16.37■□□□□ 0.21
MCF2L-232ENST00000535094 UQCRBP14927 111 aa16.37■□□□□ 0.21
MCF2L-232ENST00000535094 EPHA3P29320 983 aa16.37■□□□□ 0.21
MCF2L-232ENST00000535094 ALDH1A3P47895 512 aa16.37■□□□□ 0.21
MCF2L-232ENST00000535094 SERPINB9P50453 376 aa16.37■□□□□ 0.21
MCF2L-232ENST00000535094 PGGT1BP53609 377 aa16.37■□□□□ 0.21
MCF2L-232ENST00000535094 MRPS5P82675 430 aaKnown RBP16.37■□□□□ 0.21
MCF2L-232ENST00000535094 LAMTOR4Q0VGL1 99 aa16.37■□□□□ 0.21
MCF2L-232ENST00000535094 LY6KQ17RY6 165 aa16.37■□□□□ 0.21
MCF2L-232ENST00000535094 FAM183BPQ6ZVS7 135 aa16.37■□□□□ 0.21
MCF2L-232ENST00000535094 NLRP7Q8WX94 980 aa16.37■□□□□ 0.21
MCF2L-232ENST00000535094 C7orf26Q96N11 449 aa16.37■□□□□ 0.21
MCF2L-232ENST00000535094 SNRNP25Q9BV90 132 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms