RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 KDRP35968 1356 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 BICDL2A1A5D9 508 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 ISM1B1AKI9 464 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 UBE2Q2LH0YL09 131 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 M0R3H8 397 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 KIF2AO00139 706 aaPredicted RBP4.71□□□□□ -1.66
ITGB1-219ENST00000534049 PSMD9O00233 223 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 ATP8B1O43520 1251 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 CAND2O75155 1236 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 LATS1O95835 1130 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 TUBB4AP04350 444 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 CHRM5P08912 532 aaPredicted RBP4.71□□□□□ -1.66
ITGB1-219ENST00000534049 ENGP17813 658 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 PAX3P23760 479 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 U2AF2P26368 475 aaKnown RBP eCLIP4.71□□□□□ -1.66
ITGB1-219ENST00000534049 TRPC1P48995 793 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 IFT88Q13099 833 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 INSCQ1MX18 579 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 CERKLQ49MI3 558 aaPredicted RBP4.71□□□□□ -1.66
ITGB1-219ENST00000534049 C4orf46Q504U0 113 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 PLA1AQ53H76 456 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 FAM102BQ5T8I3 360 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 PRAMEF17Q5VTA0 474 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 DENND2CQ68D51 928 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 NXNQ6DKJ4 435 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 NPNTQ6UXI9 565 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 CENPQQ7L2Z9 268 aaPredicted RBP4.71□□□□□ -1.66
ITGB1-219ENST00000534049 CCDC186Q7Z3E2 898 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 C1QL2Q7Z5L3 287 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 NEK8Q86SG6 692 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 KIAA1328Q86T90 577 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 IQCF2Q8IXL9 164 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 TEX11Q8IYF3 940 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 IZUMO1Q8IYV9 350 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 CELF5Q8N6W0 485 aaKnown RBP4.71□□□□□ -1.66
ITGB1-219ENST00000534049 ZBTB34Q8NCN2 500 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 GOLGA5Q8TBA6 731 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 TRIM7Q9C029 511 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 MS4A7Q9GZW8 240 aaPredicted RBP4.71□□□□□ -1.66
ITGB1-219ENST00000534049 RMI1Q9H9A7 625 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 METTL14Q9HCE5 456 aaKnown RBP4.71□□□□□ -1.66
ITGB1-219ENST00000534049 XPNPEP3Q9NQH7 507 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 PSD3Q9NYI0 1048 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 TFCP2L1Q9NZI6 479 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.71□□□□□ -1.66
ITGB1-219ENST00000534049 RGS17Q9UGC6 210 aaPredicted RBP4.71□□□□□ -1.66
ITGB1-219ENST00000534049 NHSL1Q5SYE7 1610 aa4.71□□□□□ -1.66
ITGB1-219ENST00000534049 SHPRHQ149N8 1683 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 NUP155O75694 1391 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 PIK3R4Q99570 1358 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 PLEKHG2Q9H7P9 1386 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 PHLPP1O60346 1717 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-219ENST00000534049 MBD3L4A6NDZ8 208 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-219ENST00000534049 MBD3L3A6NE82 208 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-219ENST00000534049 SH3BP5O60239 455 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 USP1O94782 785 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 S100BP04271 92 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-219ENST00000534049 CSF1RP07333 972 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 MYCLP12524 364 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-219ENST00000534049 SKILP12757 684 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 PHKG2P15735 406 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 KCNA3P22001 575 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 KELP23276 732 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 YY1P25490 414 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 SLC7A1P30825 629 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 PRKAR1BP31321 381 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 ZNF81P51508 661 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 CACNB3P54284 484 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 EIF5P55010 431 aaKnown RBP4.7□□□□□ -1.66
ITGB1-219ENST00000534049 SUMO2P61956 95 aaKnown RBP4.7□□□□□ -1.66
ITGB1-219ENST00000534049 TMEM119Q4V9L6 283 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 DEPDC1Q5TB30 811 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 MORN5Q5VZ52 161 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 CLEC4GQ6UXB4 293 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 ZNF782Q6ZMW2 699 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-219ENST00000534049 SRLQ86TD4 932 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 ERC1Q8IUD2 1116 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 CHPFQ8IZ52 775 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 MYOCDQ8IZQ8 938 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 SPARTQ8N0X7 666 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 ABRAQ8N0Z2 381 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 MPP5Q8N3R9 675 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 PDILTQ8N807 584 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 CCDC191Q8NCU4 936 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 ZNF397Q8NF99 534 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-219ENST00000534049 KIF18AQ8NI77 898 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 PPP1R35Q8TAP8 253 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 RUNDC1Q96C34 613 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 KIF1BPQ96EK5 621 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 CCDC34Q96HJ3 373 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 SNX18Q96RF0 628 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 B3GNT5Q9BYG0 378 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 PANK3Q9H999 370 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 ZMAT3Q9HA38 289 aaKnown RBP4.7□□□□□ -1.66
ITGB1-219ENST00000534049 HOMER3Q9NSC5 361 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 POLKQ9UBT6 870 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 ITGB1BP2Q9UKP3 347 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 EID1Q9Y6B2 187 aa4.7□□□□□ -1.66
ITGB1-219ENST00000534049 COMMD10Q9Y6G5 202 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms