RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 SLC47A2Q86VL8 602 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 DDX42Q86XP3 938 aaKnown RBP eCLIP10.07□□□□□ -0.8
SSBP3-215ENST00000533946 CACUL1Q86Y37 369 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 TMEFF1Q8IYR6 380 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 ZNF276Q8N554 614 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 ZNF513Q8N8E2 541 aaPredicted RBP10.07□□□□□ -0.8
SSBP3-215ENST00000533946 TRIML1Q8N9V2 468 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 TSTD1Q8NFU3 115 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 OLIG1Q8TAK6 271 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 CYB5D2Q8WUJ1 264 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 FAXDC2Q96IV6 333 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 RAB6CQ9H0N0 254 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 DLL3Q9NYJ7 618 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 TAB2Q9NYJ8 693 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 FHOD1Q9Y613 1164 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 SLCO1B1Q9Y6L6 691 aa10.07□□□□□ -0.8
SSBP3-215ENST00000533946 ATXN2Q99700 1313 aaKnown RBP10.07□□□□□ -0.8
SSBP3-215ENST00000533946 PI4KAP42356 2102 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 I6L893 689 aaPredicted RBP10.06□□□□□ -0.8
SSBP3-215ENST00000533946 P4HA2O15460 535 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 ATG13O75143 517 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 GRAP2O75791 330 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 RALAP11233 206 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 NDUFV2P19404 249 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 PRKCHP24723 683 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 HOXD9P28356 352 aaPredicted RBP10.06□□□□□ -0.8
SSBP3-215ENST00000533946 GGCXP38435 758 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 IL12RB1P42701 662 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 TNFRSF4P43489 277 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 MTIF2P46199 727 aaKnown RBP10.06□□□□□ -0.8
SSBP3-215ENST00000533946 RPL34P49207 117 aaKnown RBP10.06□□□□□ -0.8
SSBP3-215ENST00000533946 MRPS21P82921 87 aaKnown RBP10.06□□□□□ -0.8
SSBP3-215ENST00000533946 AMPD2Q01433 879 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 PLA2G2CQ5R387 149 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 OTUD1Q5VV17 481 aaPredicted RBP10.06□□□□□ -0.8
SSBP3-215ENST00000533946 PRR23CQ6ZRP0 262 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 TAC4Q86UU9 113 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 FAM217AQ8IXS0 508 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 CFAP52Q8N1V2 620 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 CAMKK1Q8N5S9 505 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 DQX1Q8TE96 717 aaKnown RBP10.06□□□□□ -0.8
SSBP3-215ENST00000533946 SHC3Q92529 594 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 OTUB2Q96DC9 234 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 FCRL2Q96LA5 508 aaPredicted RBP10.06□□□□□ -0.8
SSBP3-215ENST00000533946 PRICKLE1Q96MT3 831 aaPredicted RBP10.06□□□□□ -0.8
SSBP3-215ENST00000533946 IPO9Q96P70 1041 aaKnown RBP10.06□□□□□ -0.8
SSBP3-215ENST00000533946 CPXM1Q96SM3 734 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 NUP62CLQ9H1M0 184 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 HSD3B7Q9H2F3 369 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 ANLNQ9NQW6 1124 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 ST7Q9NRC1 585 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 TMPRSS4Q9NRS4 437 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 HESX1Q9UBX0 185 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 DNAJC12Q9UKB3 198 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 SNX10Q9Y5X0 201 aa10.06□□□□□ -0.8
SSBP3-215ENST00000533946 KCNJ18B7U540 433 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 THAP12O43422 761 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 EPN2O95208 641 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 IGLV3-27P01718 113 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 LTFP02788 710 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 ERBB2P04626 1255 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 SETSIPP0DME0 302 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 HOXB2P14652 356 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 HLA-FP30511 346 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 GBP1P32455 592 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 CD70P32970 193 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 EIF2DP41214 584 aaKnown RBP10.05□□□□□ -0.8
SSBP3-215ENST00000533946 DGKGP49619 791 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 PSEN1P49768 467 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 RPS24P62847 133 aaKnown RBP10.05□□□□□ -0.8
SSBP3-215ENST00000533946 CREB5Q02930 508 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 PPP2R5DQ14738 602 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 VWA3BQ502W6 1294 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 FSCBQ5H9T9 825 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 ARTNQ5T4W7 220 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 TRNP1Q6NT89 227 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 MSANTD2Q6P1R3 559 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 CACNA2D4Q7Z3S7 1137 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 PHLDB2Q86SQ0 1253 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 CIR1Q86X95 450 aaPredicted RBP10.05□□□□□ -0.8
SSBP3-215ENST00000533946 SIX6OS1Q8N1H7 587 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 TTC39CQ8N584 583 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 KIAA1958Q8N8K9 716 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 MLKLQ8NB16 471 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 C1orf131Q8NDD1 294 aaKnown RBP10.05□□□□□ -0.8
SSBP3-215ENST00000533946 OR2I1PQ8NGU4 316 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 ZC3H10Q96K80 434 aaKnown RBP10.05□□□□□ -0.8
SSBP3-215ENST00000533946 LMLNQ96KR4 655 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 SLC4A5Q9BY07 1137 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 MAGEB5Q9BZ81 275 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 MKRN2Q9H000 416 aaKnown RBP10.05□□□□□ -0.8
SSBP3-215ENST00000533946 NUCKS1Q9H1E3 243 aaKnown RBP10.05□□□□□ -0.8
SSBP3-215ENST00000533946 CNGB3Q9NQW8 809 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 APEX2Q9UBZ4 518 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 LSM7Q9UK45 103 aaKnown RBP10.05□□□□□ -0.8
SSBP3-215ENST00000533946 GMEB2Q9UKD1 530 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 INTS6Q9UL03 887 aaKnown RBP10.05□□□□□ -0.8
SSBP3-215ENST00000533946 STARD13Q9Y3M8 1113 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 PLXND1Q9Y4D7 1925 aa10.05□□□□□ -0.8
SSBP3-215ENST00000533946 ZZEF1O43149 2961 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms