RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 LRCH1Q9Y2L9 728 aa19.99■□□□□ 0.79
CAPN1-226ENST00000533820 MGAMO43451 1857 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 EPHB1P54762 984 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 PEX6Q13608 980 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 KRT72Q14CN4 511 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 ZRSR2Q15696 482 aaKnown RBP19.98■□□□□ 0.79
CAPN1-226ENST00000533820 AMHR2Q16671 573 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 TSHZ1Q6ZSZ6 1077 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 SH3TC2Q8TF17 1288 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 PANX3Q96QZ0 392 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 PCDH18Q9HCL0 1135 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 MAGED2Q9UNF1 606 aaPredicted RBP19.98■□□□□ 0.79
CAPN1-226ENST00000533820 GINS2Q9Y248 185 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 ZNF510Q9Y2H8 683 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 TRIP11Q15643 1979 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 SPECC1L-ADORA2AF8WAN1 911 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 ITM2AO43736 263 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 SORBS2O94875 1100 aaKnown RBP19.98■□□□□ 0.79
CAPN1-226ENST00000533820 C6orf222P0C671 652 aaPredicted RBP19.98■□□□□ 0.79
CAPN1-226ENST00000533820 DEUP1Q05D60 604 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 GRM1Q13255 1194 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 LGSNQ5TDP6 509 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 ATG16L1Q676U5 607 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 PMF1Q6P1K2 205 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 METTL7BQ6UX53 244 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 ACOT1Q86TX2 421 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 CCNJLQ8IV13 435 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 MAP7D3Q8IWC1 876 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 CYP4F11Q9HBI6 524 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 STX18Q9P2W9 335 aaKnown RBP19.98■□□□□ 0.79
CAPN1-226ENST00000533820 PHIPQ8WWQ0 1821 aa19.98■□□□□ 0.79
CAPN1-226ENST00000533820 HCRTO43612 131 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 KRT38O76015 456 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 DESP17661 470 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 SESN2P58004 480 aaPredicted RBP19.97■□□□□ 0.79
CAPN1-226ENST00000533820 STX3Q13277 289 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 GOLGA7BQ2TAP0 167 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 CES3Q6UWW8 571 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 DENND5BQ6ZUT9 1274 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 ULK2Q8IYT8 1036 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 C7orf31Q8N865 590 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 DNERQ8NFT8 737 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 DTNBP1Q96EV8 351 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 ATXN7L3BQ96GX2 97 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 SPATA33Q96N06 139 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 WWP1Q9H0M0 922 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 PTPRHQ9HD43 1115 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 KCNK4Q9NYG8 393 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 SLC7A8Q9UHI5 535 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 SCOCQ9UIL1 159 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 OCRLQ01968 901 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 FAM47CQ5HY64 1035 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 IZUMO2Q6UXV1 221 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 TMPRSS6Q8IU80 811 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 FBXO16Q8IX29 292 aaPredicted RBP19.97■□□□□ 0.79
CAPN1-226ENST00000533820 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.97■□□□□ 0.79
CAPN1-226ENST00000533820 STKLD1Q8NE28 680 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 GSTCDQ8NEC7 633 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 CLEC4CQ8WTT0 213 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 CXCL16Q9H2A7 254 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 PPM1HQ9ULR3 514 aa19.97■□□□□ 0.79
CAPN1-226ENST00000533820 C19orf81C9J6K1 198 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 CIB2O75838 187 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 CACNA2D1P54289 1103 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 ZNF280AP59817 542 aaPredicted RBP19.96■□□□□ 0.79
CAPN1-226ENST00000533820 SFSWAPQ12872 951 aaKnown RBP19.96■□□□□ 0.79
CAPN1-226ENST00000533820 SLC10A2Q12908 348 aaPredicted RBP19.96■□□□□ 0.79
CAPN1-226ENST00000533820 RPL26L1Q9UNX3 145 aaKnown RBP19.96■□□□□ 0.79
CAPN1-226ENST00000533820 HBS1LQ9Y450 684 aaKnown RBP19.96■□□□□ 0.79
CAPN1-226ENST00000533820 RLFQ13129 1914 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 SYNJ2BP-COX16A0A087WUM0 186 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 A0A087WZ62 844 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.96■□□□□ 0.79
CAPN1-226ENST00000533820 WDR27A2RRH5 827 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 CAPN14A8MX76 684 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 FAM200BP0CF97 657 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 ADGRF2Q8IZF7 708 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 ARHGAP24Q8N264 748 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 MTBPQ96DY7 904 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 FDXACB1Q9BRP7 624 aaPredicted RBP19.96■□□□□ 0.79
CAPN1-226ENST00000533820 COX16Q9P0S2 106 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 LOC100653049A0A140TA62 436 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 SPAG6O75602 509 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 KRT34O76011 436 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 PDE5AO76074 875 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 VTNP04004 478 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 ZNF24P17028 368 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 SDC4P31431 198 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 PHKA2P46019 1235 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 FASTKD1Q53R41 847 aaKnown RBP19.96■□□□□ 0.79
CAPN1-226ENST00000533820 PPP1R26Q5T8A7 1209 aaPredicted RBP19.96■□□□□ 0.79
CAPN1-226ENST00000533820 VWA5B1Q5TIE3 1220 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 AGR3Q8TD06 166 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 PYDC1Q8WXC3 89 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 GPR20Q99678 358 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 VCXQ9H320 206 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 DNAJC16Q9Y2G8 782 aa19.96■□□□□ 0.79
CAPN1-226ENST00000533820 ZMPSTE24O75844 475 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 USP46P62068 366 aa19.95■□□□□ 0.78
CAPN1-226ENST00000533820 MBTD1Q05BQ5 628 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms