RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 MORF4L2Q15014 288 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 CNKSR3Q6P9H4 555 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 RBM43Q6ZSC3 357 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 MCOLN2Q8IZK6 566 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 CPA6Q8N4T0 437 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 BLOC1S5Q8TDH9 187 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 WNT8BQ93098 351 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 ZNF669Q96BR6 464 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 NFKBIZQ9BYH8 718 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 CLPBQ9H078 707 aa11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 UBA2Q9UBT2 640 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-211ENST00000533727 PPP3CCP48454 512 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 MED21Q13503 144 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 LRRC14Q15048 493 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 RNF135Q8IUD6 432 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 ANKRD52Q8NB46 1076 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 PRKD2Q9BZL6 878 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 SLC40A1Q9NP59 571 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 AMACRQ9UHK6 382 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 MAGEB16A2A368 324 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 TREHO43280 583 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 CDH16O75309 829 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 NFICP08651 508 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 PTPN3P26045 913 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 SERPINA4P29622 427 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 CYLC2Q14093 348 aaPredicted RBP11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 DEFB106AQ8N104 65 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 C3orf20Q8ND61 904 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 C7orf43Q8WVR3 580 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 EDEM1Q92611 657 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 LRRC40Q9H9A6 602 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 TMEM161AQ9NX61 479 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 SLC39A10Q9ULF5 831 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 FAM237AA0A1B0GTK4 181 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 IFRD1O00458 451 aaPredicted RBP11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 RPN2P04844 631 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 WEE1P30291 646 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 PHKG1Q16816 387 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 RARS2Q5T160 578 aaKnown RBP11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 PLPP4Q5VZY2 271 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 SLC26A7Q8TE54 656 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 DNAJC9Q8WXX5 260 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 SMG7Q92540 1137 aaKnown RBP11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 MTBPQ96DY7 904 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 HIC2Q96JB3 615 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 LZTS1Q9Y250 596 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 L3MBTL1Q9Y468 752 aa11.59□□□□□ -0.55
AMBRA1-211ENST00000533727 RNF103-CHMP3A0A140T963 221 aa11.58□□□□□ -0.55
AMBRA1-211ENST00000533727 B4GALT4O60513 344 aa11.58□□□□□ -0.55
AMBRA1-211ENST00000533727 GRK3P35626 688 aa11.58□□□□□ -0.55
AMBRA1-211ENST00000533727 SARSP49591 514 aaKnown RBP11.58□□□□□ -0.55
AMBRA1-211ENST00000533727 TGM3Q08188 693 aa11.58□□□□□ -0.55
AMBRA1-211ENST00000533727 CCNI2Q6ZMN8 369 aaPredicted RBP11.58□□□□□ -0.55
AMBRA1-211ENST00000533727 APLFQ8IW19 511 aaPredicted RBP11.58□□□□□ -0.55
AMBRA1-211ENST00000533727 RNF217Q8TC41 542 aa11.58□□□□□ -0.55
AMBRA1-211ENST00000533727 LZICQ8WZA0 190 aa11.58□□□□□ -0.55
AMBRA1-211ENST00000533727 ST6GALNAC4Q9H4F1 302 aa11.58□□□□□ -0.55
AMBRA1-211ENST00000533727 CD274Q9NZQ7 290 aa11.58□□□□□ -0.55
AMBRA1-211ENST00000533727 PSMC3IPQ9P2W1 217 aaPredicted RBP11.58□□□□□ -0.55
AMBRA1-211ENST00000533727 SYCE1LA8MT33 242 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 GLI1P08151 1106 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 MRPS15P82914 257 aaKnown RBP11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 TLE2Q04725 743 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 SLC44A4Q53GD3 710 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 COBLL1Q53SF7 1204 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 SPOCD1Q6ZMY3 1216 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 OTUB1Q96FW1 271 aaPredicted RBP11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 DDX28Q9NUL7 540 aaKnown RBP11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 TBC1D23Q9NUY8 699 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 INSL6Q9Y581 213 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 A0A087X0T9 212 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 FAM228BP0C875 321 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 SULT2A1Q06520 285 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 ENPEPQ07075 957 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 BCL2L1Q07817 233 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 FBXO46Q6PJ61 603 aaPredicted RBP11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 OTOP2Q7RTS6 562 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 SLC47A2Q86VL8 602 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 SUGP1Q8IWZ8 645 aaKnown RBP11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 SNX31Q8N9S9 440 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 LPPQ93052 612 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 MYLPFQ96A32 169 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 SEC16BQ96JE7 1060 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 BTBD6Q96KE9 485 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 ASPSCR1Q9BZE9 553 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 CNGB3Q9NQW8 809 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 DYRK3O43781 588 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 NFATC1O95644 943 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 SNRPAP09012 282 aaKnown RBP11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 HOXB8P17481 243 aaPredicted RBP11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 CYP2F1P24903 491 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 SERPINB3P29508 390 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 SNRPD1P62314 119 aaKnown RBP11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 FAM83EQ2M2I3 478 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 SH3RF1Q7Z6J0 888 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 JAMLQ86YT9 394 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 FAM71DQ8N9W8 422 aa11.58□□□□□ -0.56
AMBRA1-211ENST00000533727 LEMD2Q8NC56 503 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms