RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 FAM204AQ9H8W3 233 aa17.13■□□□□ 0.33
PACSIN3-210ENST00000533686 MRPL47Q9HD33 250 aaKnown RBP17.13■□□□□ 0.33
PACSIN3-210ENST00000533686 SPTLC3Q9NUV7 552 aa17.13■□□□□ 0.33
PACSIN3-210ENST00000533686 DDIT4Q9NX09 232 aa17.13■□□□□ 0.33
PACSIN3-210ENST00000533686 WNT16Q9UBV4 365 aa17.13■□□□□ 0.33
PACSIN3-210ENST00000533686 WNT6Q9Y6F9 365 aa17.13■□□□□ 0.33
PACSIN3-210ENST00000533686 NCOR1O75376 2440 aa17.13■□□□□ 0.33
PACSIN3-210ENST00000533686 TTC28Q96AY4 2481 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 HELZP42694 1942 aaKnown RBP17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 M0QYT0 321 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 GJB6O95452 261 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 H2AFZP0C0S5 128 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 ALADP13716 330 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 GPD1P21695 349 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 CORO1AP31146 461 aaKnown RBP17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 SULT1E1P49888 294 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 MLLT6P55198 1093 aaPredicted RBP17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 MTA1Q13330 715 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 CCDC14Q49A88 953 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 OTUD1Q5VV17 481 aaPredicted RBP17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 H2AFVQ71UI9 128 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 TMEM139Q8IV31 216 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 BBS7Q8IWZ6 715 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 ANP32BQ92688 251 aaKnown RBP17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 CFAP57Q96MR6 1250 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 MCEEQ96PE7 176 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 TBCBQ99426 244 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 COL25A1Q9BXS0 654 aaPredicted RBP17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 HPS4Q9NQG7 708 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 STOML2Q9UJZ1 356 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 AGO1Q9UL18 857 aaKnown RBP17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 INTUQ9ULD6 942 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 EPN1Q9Y6I3 576 aaPredicted RBP17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 VCANP13611 3396 aa17.12■□□□□ 0.33
PACSIN3-210ENST00000533686 TMEM191CA6NGB0 347 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 EIF3CLB5ME19 914 aaKnown RBP17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 ATMINO43313 823 aaPredicted RBP17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 NFATC1O95644 943 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 GLULP15104 373 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 CCR1P32246 355 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 ZNF143P52747 638 aaPredicted RBP17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 RPL7AP62424 266 aaKnown RBP17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 RUNX3Q13761 415 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 PPP2R5DQ14738 602 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 ITPRIPL2Q3MIP1 535 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 TRIM68Q6AZZ1 485 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 STRADAQ7RTN6 431 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 DENND1CQ8IV53 801 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 FAM217AQ8IXS0 508 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 CSGALNACT1Q8TDX6 532 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 FNIP1Q8TF40 1166 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 CTNNBL1Q8WYA6 563 aaPredicted RBP17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 CENPIQ92674 756 aaPredicted RBP17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 EDAQ92838 391 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 EIF3CQ99613 913 aaKnown RBP17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 CNPY3Q9BT09 278 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 ADAM33Q9BZ11 813 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 EBF3Q9H4W6 596 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 CALCOCO1Q9P1Z2 691 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 MYO1AQ9UBC5 1043 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 PAXBP1Q9Y5B6 917 aa17.11■□□□□ 0.33
PACSIN3-210ENST00000533686 A0A0C4DFX4 3053 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 SOWAHDA6NJG2 315 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 KCNU1A8MYU2 1149 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 PI4K2BG5E9Z4 385 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 TNFRSF10AO00220 468 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 NDUFA10O95299 355 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 APOEP02649 317 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 TMEM253P0C7T8 217 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 ARSAP15289 507 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 TFE3P19532 575 aaPredicted RBP17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 RDXP35241 583 aaKnown RBP17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 CHKAP35790 457 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 SLC11A2P49281 568 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 CXCR3P49682 368 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 DEUP1Q05D60 604 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 TNK2Q07912 1038 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 NR1H3Q13133 447 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 NME3Q13232 169 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 SPA17Q15506 151 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 SLC44A4Q53GD3 710 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 ZC3H12AQ5D1E8 599 aaKnown RBP17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 BRMS1LQ5PSV4 323 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 SND1Q7KZF4 910 aaKnown RBP eCLIP17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 CPXM2Q8N436 756 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 CPA6Q8N4T0 437 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 PACSIN1Q9BY11 444 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 IRX2Q9BZI1 471 aaPredicted RBP17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 C8orf33Q9H7E9 229 aaPredicted RBP17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 ECT2Q9H8V3 914 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 PIGVQ9NUD9 493 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 SLC12A6Q9UHW9 1150 aa17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 KIF26AQ9ULI4 1882 aaPredicted RBP17.1■□□□□ 0.33
PACSIN3-210ENST00000533686 SCAMP3O14828 347 aaKnown RBP17.09■□□□□ 0.33
PACSIN3-210ENST00000533686 ACSL4O60488 711 aa17.09■□□□□ 0.33
PACSIN3-210ENST00000533686 DESP17661 470 aa17.09■□□□□ 0.33
PACSIN3-210ENST00000533686 MAGEA1P43355 309 aa17.09■□□□□ 0.33
PACSIN3-210ENST00000533686 ATP11AP98196 1134 aa17.09■□□□□ 0.33
PACSIN3-210ENST00000533686 SIGLEC14Q08ET2 396 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms