RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 TFE3P19532 575 aaPredicted RBP18.04■□□□□ 0.48
PHRF1-205ENST00000533464 NCKAP1LP55160 1127 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 AMPD2Q01433 879 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 FSCN1Q16658 493 aaKnown RBP18.04■□□□□ 0.48
PHRF1-205ENST00000533464 KBTBD12Q3ZCT8 623 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 TTMPQ5BVD1 217 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 PPP1R13LQ8WUF5 828 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 APBB2Q92870 758 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 PGLYRP2Q96PD5 576 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 BRD8Q9H0E9 1235 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 BCL9LQ86UU0 1499 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 RHOCP08134 193 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 UBTFL6P0CB48 400 aaPredicted RBP18.04■□□□□ 0.48
PHRF1-205ENST00000533464 ETS1P14921 441 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 MARSP56192 900 aaKnown RBP18.04■□□□□ 0.48
PHRF1-205ENST00000533464 PPIL2Q13356 520 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 AARS2Q5JTZ9 985 aaKnown RBP18.04■□□□□ 0.48
PHRF1-205ENST00000533464 CARNMT1Q8N4J0 409 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 DACH2Q96NX9 599 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 SRPK1Q96SB4 655 aaKnown RBP18.04■□□□□ 0.48
PHRF1-205ENST00000533464 ACO2Q99798 780 aaKnown RBP18.04■□□□□ 0.48
PHRF1-205ENST00000533464 DMAP1Q9NPF5 467 aaPredicted RBP18.04■□□□□ 0.48
PHRF1-205ENST00000533464 PCYOX1Q9UHG3 505 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 SPDYE5A6NIY4 337 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 DCDC2CA8MYV0 355 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 SCNN1BP51168 640 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 ATN1P54259 1190 aaPredicted RBP18.04■□□□□ 0.48
PHRF1-205ENST00000533464 LRRC74AQ0VAA2 488 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 FAAP100Q0VG06 881 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 ITGA9Q13797 1035 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 KRT72Q14CN4 511 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 SPDYE7PQ495Y7 208 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 SCUBE1Q8IWY4 988 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 ATXN2LQ8WWM7 1075 aaKnown RBP18.04■□□□□ 0.48
PHRF1-205ENST00000533464 HES6Q96HZ4 224 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 SCHIP1Q9P0W5 487 aaPredicted RBP18.04■□□□□ 0.48
PHRF1-205ENST00000533464 UBR1Q8IWV7 1749 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 RBP1P09455 135 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 YBX3P16989 372 aaKnown RBP eCLIP18.04■□□□□ 0.48
PHRF1-205ENST00000533464 TUBP50607 506 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 NBPF20Q3BBV1 942 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 C17orf80Q9BSJ5 609 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 CTNNAL1Q9UBT7 734 aa18.04■□□□□ 0.48
PHRF1-205ENST00000533464 DDX5P17844 614 aaKnown RBP18.03■□□□□ 0.48
PHRF1-205ENST00000533464 PPP2R3CQ969Q6 453 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 INPP4AQ96PE3 977 aaPredicted RBP18.03■□□□□ 0.48
PHRF1-205ENST00000533464 TINF2Q9BSI4 451 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 ULBP1Q9BZM6 244 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 SCUBE2Q9NQ36 999 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 ROBO3Q96MS0 1386 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 SKOR1P84550 965 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 CNDP1Q96KN2 507 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 SENP8Q96LD8 212 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 PCDHB5Q9Y5E4 795 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 MYO1GB0I1T2 1018 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 PLA2G6O60733 806 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 GLP2RO95838 553 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 LRRC38Q5VT99 294 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 ZNF555Q8NEP9 628 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 ZNF333Q96JL9 665 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 AAASQ9NRG9 546 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 MRPL42Q9Y6G3 142 aaKnown RBP18.03■□□□□ 0.48
PHRF1-205ENST00000533464 CRTAMO95727 393 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 USP17L7P0C7H9 530 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 TBX4P57082 545 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 PLIN5Q00G26 463 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 SPDYCQ5MJ68 293 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 DDI1Q8WTU0 396 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 FAM162AQ96A26 154 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 APOPT1Q96IL0 206 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 UBXN6Q9BZV1 441 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 FBXO44Q9H4M3 255 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 POPDC2Q9HBU9 364 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 TBC1D13Q9NVG8 400 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 TAGLN3Q9UI15 199 aa18.03■□□□□ 0.48
PHRF1-205ENST00000533464 FAM32AQ9Y421 112 aaKnown RBP18.03■□□□□ 0.48
PHRF1-205ENST00000533464 MANSC4A6NHS7 340 aaPredicted RBP18.02■□□□□ 0.48
PHRF1-205ENST00000533464 SHBGP04278 402 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 KCNA4P22459 653 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 RPL7AP62424 266 aaKnown RBP18.02■□□□□ 0.48
PHRF1-205ENST00000533464 ELAVL2Q12926 359 aaKnown RBP18.02■□□□□ 0.48
PHRF1-205ENST00000533464 ECSITQ9BQ95 431 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 XPNPEP3Q9NQH7 507 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 DLGAP2Q9P1A6 1054 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 KANSL3Q9P2N6 904 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 C5orf58C9J3I9 102 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 RAMP2O60895 175 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 USP12O75317 370 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 TOMM70O94826 608 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 LYPLA2O95372 231 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 GJB1P08034 283 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 BDNFP23560 247 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 TNFRSF8P28908 595 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 PTPN4P29074 926 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 RENBPP51606 427 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 RTP1P59025 263 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 NOMO3P69849 1222 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 FOXR1Q6PIV2 292 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 OR9Q1Q8NGQ5 310 aa18.02■□□□□ 0.48
PHRF1-205ENST00000533464 ATXN3LQ9H3M9 355 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms