RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 SLC6A3Q01959 620 aa21.31■■□□□ 1
CCS-208ENST00000533244 ANO4Q32M45 955 aa21.31■■□□□ 1
CCS-208ENST00000533244 OR6B2Q6IFH4 312 aa21.31■■□□□ 1
CCS-208ENST00000533244 PKN3Q6P5Z2 889 aa21.31■■□□□ 1
CCS-208ENST00000533244 TPGS1Q6ZTW0 290 aa21.31■■□□□ 1
CCS-208ENST00000533244 TOGARAM2Q6ZUX3 1019 aa21.31■■□□□ 1
CCS-208ENST00000533244 CACNA2D4Q7Z3S7 1137 aa21.31■■□□□ 1
CCS-208ENST00000533244 TAC4Q86UU9 113 aa21.31■■□□□ 1
CCS-208ENST00000533244 FCRL2Q96LA5 508 aaPredicted RBP21.31■■□□□ 1
CCS-208ENST00000533244 BBS2Q9BXC9 721 aa21.31■■□□□ 1
CCS-208ENST00000533244 TTYH3Q9C0H2 523 aa21.31■■□□□ 1
CCS-208ENST00000533244 TLR6Q9Y2C9 796 aa21.31■■□□□ 1
CCS-208ENST00000533244 FANCMQ8IYD8 2048 aa21.31■■□□□ 1
CCS-208ENST00000533244 NEDD8-MDP1E9PL57 170 aa21.3■■□□□ 1
CCS-208ENST00000533244 CAPN9O14815 690 aa21.3■■□□□ 1
CCS-208ENST00000533244 PBX1P40424 430 aa21.3■■□□□ 1
CCS-208ENST00000533244 TBX4P57082 545 aa21.3■■□□□ 1
CCS-208ENST00000533244 SATB1Q01826 763 aa21.3■■□□□ 1
CCS-208ENST00000533244 FYB2Q5VWT5 728 aa21.3■■□□□ 1
CCS-208ENST00000533244 NUGGCQ68CJ6 796 aa21.3■■□□□ 1
CCS-208ENST00000533244 LRSAM1Q6UWE0 723 aa21.3■■□□□ 1
CCS-208ENST00000533244 ATOH1Q92858 354 aaPredicted RBP21.3■■□□□ 1
CCS-208ENST00000533244 AZIN2Q96A70 460 aa21.3■■□□□ 1
CCS-208ENST00000533244 SYNCQ9H7C4 482 aa21.3■■□□□ 1
CCS-208ENST00000533244 ARHGEF4Q9NR80 690 aa21.3■■□□□ 1
CCS-208ENST00000533244 C2orf42Q9NWW7 574 aa21.3■■□□□ 1
CCS-208ENST00000533244 FBXO10Q9UK96 956 aa21.3■■□□□ 1
CCS-208ENST00000533244 IRAK2O43187 625 aa21.29■■□□□ 1
CCS-208ENST00000533244 KAT7O95251 611 aa21.29■■□□□ 1
CCS-208ENST00000533244 NBL1P41271 181 aa21.29■■□□□ 1
CCS-208ENST00000533244 GRIA2P42262 883 aa21.29■■□□□ 1
CCS-208ENST00000533244 CXCL12P48061 93 aa21.29■■□□□ 1
CCS-208ENST00000533244 PITX1P78337 314 aaPredicted RBP21.29■■□□□ 1
CCS-208ENST00000533244 NAA35Q5VZE5 725 aa21.29■■□□□ 1
CCS-208ENST00000533244 TRIM72Q6ZMU5 477 aa21.29■■□□□ 1
CCS-208ENST00000533244 ERICH1Q86X53 443 aa21.29■■□□□ 1
CCS-208ENST00000533244 XYLT1Q86Y38 959 aa21.29■■□□□ 1
CCS-208ENST00000533244 UNC45BQ8IWX7 931 aa21.29■■□□□ 1
CCS-208ENST00000533244 DEFB106AQ8N104 65 aa21.29■■□□□ 1
CCS-208ENST00000533244 NAT16Q8N8M0 369 aa21.29■■□□□ 1
CCS-208ENST00000533244 C18orf8Q96DM3 657 aa21.29■■□□□ 1
CCS-208ENST00000533244 XPO6Q96QU8 1125 aaKnown RBP21.29■■□□□ 1
CCS-208ENST00000533244 FAM86C1Q9NVL1 165 aa21.29■■□□□ 1
CCS-208ENST00000533244 DEC1Q9P2X7 70 aa21.29■■□□□ 1
CCS-208ENST00000533244 DAB1O75553 588 aa21.29■■□□□ 1
CCS-208ENST00000533244 TRUB2O95900 331 aaKnown RBP21.29■■□□□ 1
CCS-208ENST00000533244 APODP05090 189 aa21.29■■□□□ 1
CCS-208ENST00000533244 UNGP13051 313 aaPredicted RBP21.29■■□□□ 1
CCS-208ENST00000533244 FERP16591 822 aa21.29■■□□□ 1
CCS-208ENST00000533244 CSTF1Q05048 431 aaKnown RBP21.29■■□□□ 1
CCS-208ENST00000533244 KDSRQ06136 332 aa21.29■■□□□ 1
CCS-208ENST00000533244 FIGNQ5HY92 759 aa21.29■■□□□ 1
CCS-208ENST00000533244 ADGRF1Q5T601 910 aa21.29■■□□□ 1
CCS-208ENST00000533244 IRF2BP2Q7Z5L9 587 aa21.29■■□□□ 1
CCS-208ENST00000533244 SFTPA1Q8IWL2 248 aa21.29■■□□□ 1
CCS-208ENST00000533244 TERB1Q8NA31 727 aa21.29■■□□□ 1
CCS-208ENST00000533244 CCDC26Q8TAB7 109 aa21.29■■□□□ 1
CCS-208ENST00000533244 ADAM32Q8TC27 787 aa21.29■■□□□ 1
CCS-208ENST00000533244 USP33Q8TEY7 942 aa21.29■■□□□ 1
CCS-208ENST00000533244 CPA5Q8WXQ8 436 aa21.29■■□□□ 1
CCS-208ENST00000533244 FAM122AQ96E09 287 aa21.29■■□□□ 1
CCS-208ENST00000533244 PCDHB18PQ96TA0 734 aa21.29■■□□□ 1
CCS-208ENST00000533244 EDEM3Q9BZQ6 932 aa21.29■■□□□ 1
CCS-208ENST00000533244 TSPY26PQ9H489 355 aa21.29■■□□□ 1
CCS-208ENST00000533244 ATG2BQ96BY7 2078 aa21.28■■□□□ 1
CCS-208ENST00000533244 MYO15AQ9UKN7 3530 aa21.28■■□□□ 1
CCS-208ENST00000533244 K7ESF4 209 aa21.28■■□□□ 1
CCS-208ENST00000533244 ATG13O75143 517 aa21.28■■□□□ 1
CCS-208ENST00000533244 MMP8P22894 467 aa21.28■■□□□ 1
CCS-208ENST00000533244 UBASH3AP57075 661 aa21.28■■□□□ 1
CCS-208ENST00000533244 ZNF445P59923 1031 aa21.28■■□□□ 1
CCS-208ENST00000533244 ARID5AQ03989 594 aa21.28■■□□□ 1
CCS-208ENST00000533244 PREPLQ4J6C6 727 aaPredicted RBP21.28■■□□□ 1
CCS-208ENST00000533244 DCAF6Q58WW2 860 aa21.28■■□□□ 1
CCS-208ENST00000533244 TSSK4Q6SA08 328 aa21.28■■□□□ 1
CCS-208ENST00000533244 MSANTD4Q8NCY6 345 aa21.28■■□□□ 1
CCS-208ENST00000533244 OLIG1Q8TAK6 271 aa21.28■■□□□ 1
CCS-208ENST00000533244 SYT11Q9BT88 431 aa21.28■■□□□ 1
CCS-208ENST00000533244 IRX2Q9BZI1 471 aaPredicted RBP21.28■■□□□ 1
CCS-208ENST00000533244 DNAJC17Q9NVM6 304 aaKnown RBP21.28■■□□□ 1
CCS-208ENST00000533244 DMDP11532 3685 aa21.27■■□□□ 1
CCS-208ENST00000533244 ANTXRLA6NF34 631 aa21.27■■□□□ 1
CCS-208ENST00000533244 PROB1E7EW31 1015 aa21.27■■□□□ 1
CCS-208ENST00000533244 TRIM24O15164 1050 aa21.27■■□□□ 1
CCS-208ENST00000533244 ACSL4O60488 711 aa21.27■■□□□ 1
CCS-208ENST00000533244 GRAP2O75791 330 aa21.27■■□□□ 1
CCS-208ENST00000533244 CISD3P0C7P0 127 aa21.27■■□□□ 1
CCS-208ENST00000533244 TNFRSF4P43489 277 aa21.27■■□□□ 1
CCS-208ENST00000533244 KIR2DL1P43626 348 aaPredicted RBP21.27■■□□□ 1
CCS-208ENST00000533244 CENPCQ03188 943 aa21.27■■□□□ 1
CCS-208ENST00000533244 PPP2R5DQ14738 602 aa21.27■■□□□ 1
CCS-208ENST00000533244 FAM133BQ5BKY9 247 aaKnown RBP21.27■■□□□ 1
CCS-208ENST00000533244 RNF43Q68DV7 783 aa21.27■■□□□ 1
CCS-208ENST00000533244 GRAMD4Q6IC98 578 aa21.27■■□□□ 1
CCS-208ENST00000533244 RPLP0P6Q8NHW5 317 aa21.27■■□□□ 1
CCS-208ENST00000533244 PHOX2BQ99453 314 aa21.27■■□□□ 1
CCS-208ENST00000533244 FAM126AQ9BYI3 521 aaPredicted RBP21.27■■□□□ 1
CCS-208ENST00000533244 PLK2Q9NYY3 685 aa21.27■■□□□ 1
CCS-208ENST00000533244 LRRC53A6NM62 1247 aa21.26■□□□□ 0.99
CCS-208ENST00000533244 CYBBP04839 570 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms