RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ARHGAP20Q9P2F6 1191 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 WDR35Q9P2L0 1181 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 TLR6Q9Y2C9 796 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 MTF2Q9Y483 593 aaPredicted RBP12.49□□□□□ -0.41
SSBP3-214ENST00000533209 TICRRQ7Z2Z1 1910 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 TCRBV5S1A1TA0A578 114 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 TMCO5BA8MYB1 307 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 STK25O00506 426 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 MFAP3LO75121 409 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 GJB6O95452 261 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 LATS1O95835 1130 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 ADH1CP00326 375 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 GZMAP12544 262 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 TFE3P19532 575 aaPredicted RBP12.48□□□□□ -0.41
SSBP3-214ENST00000533209 AOC1P19801 751 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 TARSP26639 723 aaKnown RBP12.48□□□□□ -0.41
SSBP3-214ENST00000533209 FLT3P36888 993 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 HARS2P49590 506 aaKnown RBP12.48□□□□□ -0.41
SSBP3-214ENST00000533209 CLCN5P51795 746 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 ADKP55263 362 aaKnown RBP12.48□□□□□ -0.41
SSBP3-214ENST00000533209 UBXN2BQ14CS0 331 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 PPP1R2P3Q6NXS1 205 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 WDR59Q6PJI9 974 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 DNAAF5Q86Y56 855 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 FAM217AQ8IXS0 508 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 DRC7Q8IY82 874 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 C3orf20Q8ND61 904 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 PJA1Q8NG27 643 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 P2RY11Q96G91 374 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 VCPIP1Q96JH7 1222 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 NPY6RQ99463 290 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 METTL5Q9NRN9 209 aaKnown RBP12.48□□□□□ -0.41
SSBP3-214ENST00000533209 RRN3Q9NYV6 651 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.48□□□□□ -0.41
SSBP3-214ENST00000533209 ADAMTS1Q9UHI8 967 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 STOML2Q9UJZ1 356 aa12.48□□□□□ -0.41
SSBP3-214ENST00000533209 MRPS17Q9Y2R5 130 aaKnown RBP12.48□□□□□ -0.41
SSBP3-214ENST00000533209 FAM170BA6NMN3 283 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 GFRA2O00451 464 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 TRDMT1O14717 391 aaKnown RBP12.47□□□□□ -0.41
SSBP3-214ENST00000533209 HOXC11O43248 304 aaPredicted RBP12.47□□□□□ -0.41
SSBP3-214ENST00000533209 RTN2O75298 545 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 FTLP02792 175 aaPredicted RBP12.47□□□□□ -0.41
SSBP3-214ENST00000533209 TPM1P09493 284 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 ADH5P11766 374 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 EIF4A3P38919 411 aaKnown RBP12.47□□□□□ -0.41
SSBP3-214ENST00000533209 OPRD1P41143 372 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 VCPP55072 806 aaKnown RBP12.47□□□□□ -0.41
SSBP3-214ENST00000533209 GAD2Q05329 585 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 FZD5Q13467 585 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 PON2Q15165 354 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 ZC3H12AQ5D1E8 599 aaKnown RBP12.47□□□□□ -0.41
SSBP3-214ENST00000533209 NUGGCQ68CJ6 796 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 C1orf228Q6PIY5 440 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 C12orf40Q86WS4 652 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 UNC45BQ8IWX7 931 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 CCDC105Q8IYK2 499 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 CPXM2Q8N436 756 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 EMC1Q8N766 993 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 TMEM105Q8N8V8 129 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 JOSD2Q8TAC2 188 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 AZIN2Q96A70 460 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 TBCBQ99426 244 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 NELL2Q99435 816 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 OSBPL6Q9BZF3 934 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 ISCUQ9H1K1 167 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 FAM204AQ9H8W3 233 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 FBRSL1Q9HCM7 1045 aaKnown RBP12.47□□□□□ -0.41
SSBP3-214ENST00000533209 ABHD10Q9NUJ1 306 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 DDIT4Q9NX09 232 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 MARK1Q9P0L2 795 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 CALCOCO1Q9P1Z2 691 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 NDRG2Q9UN36 371 aaKnown RBP12.47□□□□□ -0.41
SSBP3-214ENST00000533209 SIT1Q9Y3P8 196 aa12.47□□□□□ -0.41
SSBP3-214ENST00000533209 SYNJ2BP-COX16A0A087WUM0 186 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 A0A087X0T9 212 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 GOLGA6L7A0A1B0GV03 622 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 C2CD4BA6NLJ0 364 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 SIGLEC16A6NMB1 481 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 AKR1B15C9JRZ8 316 aaPredicted RBP12.46□□□□□ -0.41
SSBP3-214ENST00000533209 M0QYT0 321 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 ACSL4O60488 711 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 FAM228BP0C875 321 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 KRT3P12035 628 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 RRM1P23921 792 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 AVPR2P30518 371 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 GBP1P32455 592 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 RFC1P35251 1148 aaPredicted RBP12.46□□□□□ -0.41
SSBP3-214ENST00000533209 CHKAP35790 457 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 SLC6A11P48066 632 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 SULT1E1P49888 294 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 GALK1P51570 392 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 AMPD2Q01433 879 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 ANO4Q32M45 955 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 SLC25A52Q3SY17 297 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 TMEM196Q5HYL7 178 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 PPP1R15BQ5SWA1 713 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 ADGRF1Q5T601 910 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 NADSYN1Q6IA69 706 aa12.46□□□□□ -0.41
SSBP3-214ENST00000533209 TPGS1Q6ZTW0 290 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms