RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 HOXB2P14652 356 aa18.61■□□□□ 0.57
SMG1-203ENST00000532700 HSP90AA4PQ58FG1 418 aa18.61■□□□□ 0.57
SMG1-203ENST00000532700 DPY19L2P1Q6NXN4 242 aa18.61■□□□□ 0.57
SMG1-203ENST00000532700 TRIM65Q6PJ69 517 aa18.61■□□□□ 0.57
SMG1-203ENST00000532700 SORCS1Q8WY21 1168 aa18.61■□□□□ 0.57
SMG1-203ENST00000532700 PIWIL1Q96J94 861 aaKnown RBP18.61■□□□□ 0.57
SMG1-203ENST00000532700 XPO6Q96QU8 1125 aaKnown RBP18.61■□□□□ 0.57
SMG1-203ENST00000532700 MIS12Q9H081 205 aa18.61■□□□□ 0.57
SMG1-203ENST00000532700 CNGB3Q9NQW8 809 aa18.61■□□□□ 0.57
SMG1-203ENST00000532700 KIAA1257Q9ULG3 409 aa18.61■□□□□ 0.57
SMG1-203ENST00000532700 GOLGA6L7A0A1B0GV03 622 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 BCLAF3A2AJT9 711 aaKnown RBP18.6■□□□□ 0.57
SMG1-203ENST00000532700 PRR5-ARHGAP8B1AHC4 643 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 KRT5P13647 590 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 NDUFV2P19404 249 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 NTSR1P30989 418 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 GPD2P43304 727 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 SLC8A3P57103 927 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 ARHGAP8P85298 464 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 CREB5Q02930 508 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 HSF5Q4G112 596 aaPredicted RBP18.6■□□□□ 0.57
SMG1-203ENST00000532700 MSANTD2Q6P1R3 559 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 ARMCX6Q7L4S7 300 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 TADA2BQ86TJ2 420 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 CREBRFQ8IUR6 639 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 SCML4Q8N228 414 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 CCDC26Q8TAB7 109 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 WFDC5Q8TCV5 224 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 PLD4Q96BZ4 506 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 CDK5RAP1Q96SZ6 601 aaKnown RBP18.6■□□□□ 0.57
SMG1-203ENST00000532700 GABRG3Q99928 467 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 CALCOCO1Q9P1Z2 691 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 CKAP5Q14008 2032 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 ADAMTS9Q9P2N4 1935 aa18.6■□□□□ 0.57
SMG1-203ENST00000532700 ATXN2Q99700 1313 aaKnown RBP18.59■□□□□ 0.57
SMG1-203ENST00000532700 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.59■□□□□ 0.57
SMG1-203ENST00000532700 SLC30A4O14863 429 aa18.59■□□□□ 0.57
SMG1-203ENST00000532700 IGLV3-27P01718 113 aa18.59■□□□□ 0.57
SMG1-203ENST00000532700 HOXD9P28356 352 aaPredicted RBP18.59■□□□□ 0.57
SMG1-203ENST00000532700 SLC6A4P31645 630 aa18.59■□□□□ 0.57
SMG1-203ENST00000532700 PTGER3P43115 390 aa18.59■□□□□ 0.57
SMG1-203ENST00000532700 RPL34P49207 117 aaKnown RBP18.59■□□□□ 0.57
SMG1-203ENST00000532700 PITX1P78337 314 aaPredicted RBP18.59■□□□□ 0.57
SMG1-203ENST00000532700 USP39Q53GS9 565 aaKnown RBP18.59■□□□□ 0.57
SMG1-203ENST00000532700 NADSYN1Q6IA69 706 aa18.59■□□□□ 0.57
SMG1-203ENST00000532700 SCUBE3Q8IX30 993 aa18.59■□□□□ 0.57
SMG1-203ENST00000532700 TMEFF1Q8IYR6 380 aa18.59■□□□□ 0.57
SMG1-203ENST00000532700 CHPFQ8IZ52 775 aa18.59■□□□□ 0.57
SMG1-203ENST00000532700 CPXM2Q8N436 756 aa18.59■□□□□ 0.57
SMG1-203ENST00000532700 DEFB119Q8N690 84 aa18.59■□□□□ 0.57
SMG1-203ENST00000532700 NETO1Q8TDF5 533 aa18.59■□□□□ 0.57
SMG1-203ENST00000532700 POLMQ9NP87 494 aaPredicted RBP18.59■□□□□ 0.57
SMG1-203ENST00000532700 ABCC13Q9NSE7 274 aa18.59■□□□□ 0.57
SMG1-203ENST00000532700 BCCIPQ9P287 314 aaKnown RBP eCLIP18.59■□□□□ 0.57
SMG1-203ENST00000532700 STRIP2Q9ULQ0 834 aa18.59■□□□□ 0.57
SMG1-203ENST00000532700 SLC27A6Q9Y2P4 619 aa18.59■□□□□ 0.57
SMG1-203ENST00000532700 LETM1O95202 739 aaPredicted RBP18.58■□□□□ 0.56
SMG1-203ENST00000532700 LTFP02788 710 aa18.58■□□□□ 0.56
SMG1-203ENST00000532700 PON1P27169 355 aa18.58■□□□□ 0.56
SMG1-203ENST00000532700 IL12RB1P42701 662 aa18.58■□□□□ 0.56
SMG1-203ENST00000532700 ELF2Q15723 593 aa18.58■□□□□ 0.56
SMG1-203ENST00000532700 ARHGAP44Q17R89 818 aa18.58■□□□□ 0.56
SMG1-203ENST00000532700 AASDHQ4L235 1098 aaPredicted RBP18.58■□□□□ 0.56
SMG1-203ENST00000532700 FAM133BQ5BKY9 247 aaKnown RBP18.58■□□□□ 0.56
SMG1-203ENST00000532700 MIIPQ5JXC2 388 aa18.58■□□□□ 0.56
SMG1-203ENST00000532700 SYPL2Q5VXT5 272 aa18.58■□□□□ 0.56
SMG1-203ENST00000532700 RFWD3Q6PCD5 774 aa18.58■□□□□ 0.56
SMG1-203ENST00000532700 ADAM32Q8TC27 787 aa18.58■□□□□ 0.56
SMG1-203ENST00000532700 IPO4Q8TEX9 1081 aaKnown RBP18.58■□□□□ 0.56
SMG1-203ENST00000532700 DCLK3Q9C098 648 aa18.58■□□□□ 0.56
SMG1-203ENST00000532700 TMEM74BQ9NUR3 256 aa18.58■□□□□ 0.56
SMG1-203ENST00000532700 NAALADL1Q9UQQ1 740 aa18.58■□□□□ 0.56
SMG1-203ENST00000532700 ZNF510Q9Y2H8 683 aa18.58■□□□□ 0.56
SMG1-203ENST00000532700 HBS1LQ9Y450 684 aaKnown RBP18.58■□□□□ 0.56
SMG1-203ENST00000532700 PCDHGA5Q9Y5G8 931 aa18.58■□□□□ 0.56
SMG1-203ENST00000532700 FAM170AA1A519 330 aa18.57■□□□□ 0.56
SMG1-203ENST00000532700 PAPSS1O43252 624 aaPredicted RBP18.57■□□□□ 0.56
SMG1-203ENST00000532700 CHKAP35790 457 aa18.57■□□□□ 0.56
SMG1-203ENST00000532700 DHPSP49366 369 aaPredicted RBP18.57■□□□□ 0.56
SMG1-203ENST00000532700 CETN1Q12798 172 aa18.57■□□□□ 0.56
SMG1-203ENST00000532700 TAF5Q15542 800 aa18.57■□□□□ 0.56
SMG1-203ENST00000532700 PGBD3Q8N328 593 aa18.57■□□□□ 0.56
SMG1-203ENST00000532700 WDTC1Q8N5D0 677 aa18.57■□□□□ 0.56
SMG1-203ENST00000532700 KCNV2Q8TDN2 545 aa18.57■□□□□ 0.56
SMG1-203ENST00000532700 DQX1Q8TE96 717 aaKnown RBP18.57■□□□□ 0.56
SMG1-203ENST00000532700 RNF139Q8WU17 664 aa18.57■□□□□ 0.56
SMG1-203ENST00000532700 ZNF606Q8WXB4 792 aa18.57■□□□□ 0.56
SMG1-203ENST00000532700 FCRL2Q96LA5 508 aaPredicted RBP18.57■□□□□ 0.56
SMG1-203ENST00000532700 PRICKLE1Q96MT3 831 aaPredicted RBP18.57■□□□□ 0.56
SMG1-203ENST00000532700 RTKNQ9BST9 563 aa18.57■□□□□ 0.56
SMG1-203ENST00000532700 SLC4A5Q9BY07 1137 aa18.57■□□□□ 0.56
SMG1-203ENST00000532700 OLA1Q9NTK5 396 aaKnown RBP18.57■□□□□ 0.56
SMG1-203ENST00000532700 XPO7Q9UIA9 1087 aaKnown RBP18.57■□□□□ 0.56
SMG1-203ENST00000532700 STOML2Q9UJZ1 356 aa18.57■□□□□ 0.56
SMG1-203ENST00000532700 STON1Q9Y6Q2 735 aa18.57■□□□□ 0.56
SMG1-203ENST00000532700 NYNRINQ9P2P1 1898 aaKnown RBP18.56■□□□□ 0.56
SMG1-203ENST00000532700 PCDH15Q96QU1 1955 aa18.56■□□□□ 0.56
SMG1-203ENST00000532700 LNP1A1A4G5 178 aa18.56■□□□□ 0.56
SMG1-203ENST00000532700 E5RJQ4 531 aa18.56■□□□□ 0.56
SMG1-203ENST00000532700 TM4SF5O14894 197 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms