RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 WASP42768 502 aa16.52■□□□□ 0.24
LDLRAD3-205ENST00000532490 GPD2P43304 727 aa16.52■□□□□ 0.24
LDLRAD3-205ENST00000532490 MFAP3P55082 362 aa16.52■□□□□ 0.24
LDLRAD3-205ENST00000532490 MSANTD2Q6P1R3 559 aa16.52■□□□□ 0.24
LDLRAD3-205ENST00000532490 MLKLQ8NB16 471 aa16.52■□□□□ 0.24
LDLRAD3-205ENST00000532490 CLEC4CQ8WTT0 213 aa16.52■□□□□ 0.24
LDLRAD3-205ENST00000532490 HMGB4Q8WW32 186 aa16.52■□□□□ 0.24
LDLRAD3-205ENST00000532490 RLN3Q8WXF3 142 aa16.52■□□□□ 0.24
LDLRAD3-205ENST00000532490 PIWIL1Q96J94 861 aaKnown RBP16.52■□□□□ 0.24
LDLRAD3-205ENST00000532490 CLSTN2Q9H4D0 955 aa16.52■□□□□ 0.24
LDLRAD3-205ENST00000532490 UBE2TQ9NPD8 197 aaPredicted RBP16.52■□□□□ 0.24
LDLRAD3-205ENST00000532490 VPS45Q9NRW7 570 aa16.52■□□□□ 0.24
LDLRAD3-205ENST00000532490 MBD1Q9UIS9 605 aaPredicted RBP16.52■□□□□ 0.24
LDLRAD3-205ENST00000532490 CLEC4EQ9ULY5 219 aa16.52■□□□□ 0.24
LDLRAD3-205ENST00000532490 DCDC2BA2VCK2 349 aa16.51■□□□□ 0.23
LDLRAD3-205ENST00000532490 HOXB2P14652 356 aa16.51■□□□□ 0.23
LDLRAD3-205ENST00000532490 LIMK1P53667 647 aa16.51■□□□□ 0.23
LDLRAD3-205ENST00000532490 GEN1Q17RS7 908 aa16.51■□□□□ 0.23
LDLRAD3-205ENST00000532490 KIAA1211LQ6NV74 962 aa16.51■□□□□ 0.23
LDLRAD3-205ENST00000532490 TRIM65Q6PJ69 517 aa16.51■□□□□ 0.23
LDLRAD3-205ENST00000532490 RNF139Q8WU17 664 aa16.51■□□□□ 0.23
LDLRAD3-205ENST00000532490 CRACR2AQ9BSW2 395 aa16.51■□□□□ 0.23
LDLRAD3-205ENST00000532490 SPTBN2O15020 2390 aa16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 TM4SF5O14894 197 aa16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 MSI1O43347 362 aaKnown RBP16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 CAVIN2O95810 425 aa16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 IGLV3-27P01718 113 aa16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 FYNP06241 537 aa16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 SLC9A1P19634 815 aa16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 CREB5Q02930 508 aa16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 ENPP2Q13822 863 aa16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 MEA1Q16626 185 aa16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 TCEAL6Q6IPX3 200 aa16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 GJB7Q6PEY0 223 aa16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 CLEC17AQ6ZS10 378 aa16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 CHPFQ8IZ52 775 aa16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 IPO4Q8TEX9 1081 aaKnown RBP16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 TCEAL3Q969E4 200 aa16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 BCCIPQ9P287 314 aaKnown RBP eCLIP16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 NCOR2Q9Y618 2525 aa16.5■□□□□ 0.23
LDLRAD3-205ENST00000532490 TNRC6BQ9UPQ9 1833 aaKnown RBP16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 GTPBP10A4D1E9 387 aaKnown RBP16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 BECN2A8MW95 431 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 WASH3PC4AMC7 463 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 FBXO21O94952 628 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 LATS1O95835 1130 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 LTFP02788 710 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 KRT5P13647 590 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 HOXD9P28356 352 aaPredicted RBP16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 HARS2P49590 506 aaKnown RBP16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 APBA1Q02410 837 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 AASDHQ4L235 1098 aaPredicted RBP16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 TMEM215Q68D42 235 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 DENND1BQ6P3S1 775 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 ENOSF1Q7L5Y1 443 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 SCUBE3Q8IX30 993 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 C12orf50Q8NA57 414 aaPredicted RBP16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 STK32AQ8WU08 396 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 ZNF606Q8WXB4 792 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 SLC4A5Q9BY07 1137 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 SLC2A11Q9BYW1 496 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 ACP6Q9NPH0 428 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 CACNA2D2Q9NY47 1150 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 THAP10Q9P2Z0 257 aaPredicted RBP16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 CYTH4Q9UIA0 394 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 GON4LQ3T8J9 2241 aa16.49■□□□□ 0.23
LDLRAD3-205ENST00000532490 CYBBP04839 570 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 NDUFV2P19404 249 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 PON1P27169 355 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 BYSLQ13895 437 aaKnown RBP16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 MPPE1Q53F39 396 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 SPDYCQ5MJ68 293 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 ADGRF1Q5T601 910 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 RNF43Q68DV7 783 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 SDE2Q6IQ49 451 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 GBP6Q6ZN66 633 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 PGBD3Q8N328 593 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 DDI1Q8WTU0 396 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 SPACA7Q96KW9 195 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 FAM81BQ96LP2 452 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 MIS12Q9H081 205 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 SIX2Q9NPC8 291 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 CALCOCO1Q9P1Z2 691 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 APEX2Q9UBZ4 518 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 RAD54BQ9Y620 910 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 STON1Q9Y6Q2 735 aa16.48■□□□□ 0.23
LDLRAD3-205ENST00000532490 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.47■□□□□ 0.23
LDLRAD3-205ENST00000532490 NPC1O15118 1278 aa16.47■□□□□ 0.23
LDLRAD3-205ENST00000532490 TSPAN3O60637 253 aa16.47■□□□□ 0.23
LDLRAD3-205ENST00000532490 LETM1O95202 739 aaPredicted RBP16.47■□□□□ 0.23
LDLRAD3-205ENST00000532490 PTGER3P43115 390 aa16.47■□□□□ 0.23
LDLRAD3-205ENST00000532490 DHPSP49366 369 aaPredicted RBP16.47■□□□□ 0.23
LDLRAD3-205ENST00000532490 ZNF445P59923 1031 aa16.47■□□□□ 0.23
LDLRAD3-205ENST00000532490 RING1Q06587 406 aa16.47■□□□□ 0.23
LDLRAD3-205ENST00000532490 EXOC3L4Q17RC7 722 aa16.47■□□□□ 0.23
LDLRAD3-205ENST00000532490 DPCR1Q3MIW9 517 aa16.47■□□□□ 0.23
LDLRAD3-205ENST00000532490 SMYD5Q6GMV2 418 aa16.47■□□□□ 0.23
LDLRAD3-205ENST00000532490 DPY19L2P1Q6NXN4 242 aa16.47■□□□□ 0.23
LDLRAD3-205ENST00000532490 BEND5Q7L4P6 421 aa16.47■□□□□ 0.23
LDLRAD3-205ENST00000532490 LPCAT2Q7L5N7 544 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms